Pseudomonas mendocina ymp: Pmen_2397
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Entry
Pmen_2397 CDS
T00510
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pmy
Pseudomonas mendocina ymp
Pathway
pmy00020
Citrate cycle (TCA cycle)
pmy00480
Glutathione metabolism
pmy01100
Metabolic pathways
pmy01110
Biosynthesis of secondary metabolites
pmy01120
Microbial metabolism in diverse environments
pmy01200
Carbon metabolism
pmy01210
2-Oxocarboxylic acid metabolism
pmy01230
Biosynthesis of amino acids
Module
pmy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pmy_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pmy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Pmen_2397
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Pmen_2397
Enzymes [BR:
pmy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Pmen_2397
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GFIT
Motif
Pfam:
IDH
DUF5363
Motif
Other DBs
NCBI-ProteinID:
ABP85153
UniProt:
A4XUY7
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All DBs
Position
2644531..2646759
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AA seq
742 aa
AA seq
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MSTPSKIIYTFTDEAPALATYSLLPIVEAFAASADISVETRDISLAGRILASFADRLDAD
KRIDDDLAKLAELTLQPDANIIKLPNISASVPQLKAAIAELQAQGYNIPDFPEDPQSEED
KEVRARYAKVLGSAVNPVLREGNSDRRAPAAVKAYARKHPHSMGKWSMASQSHADYMRGG
DFFSSEQSITMAKAGDVRIEFVGKDGKVEVKKQLALQEGEVFDSMFMSCRKLRDFFEKTL
QDCKETGVMWSLHVKATMMKVSHPIVFGHAVSVYYKDVFDKYGELFKELGVNPNNGISSV
YDKIKALPASQQEEILHDIHEVYSHRPEMAMVDSVKGITNLHIPSDVIVDASMPAMIRNS
GQMWGKDGKQKDTKAVMPESTYARIYQEMINFCKTNGAFDPTTMGSVPNVGLMAQKAEEY
GSHDKTFEMTADGTMRVVAADGTVLMQHQVEAGDIWRACQTKDAPIRDWVKLAVTRARQS
NTPAIFWLDPERAHDRELQKKVELYLKDHDLTGLDIRMMGYNEAIRVSMERMIRGLDTIS
VTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVQQLVEENYLR
WDSLGEFLALAVSLEETGIKTNNAKAKVLGKTLDQATGKLLDNNKSPARKVGEIDNRGSH
FYLALYWAQALAEQNDDAELKAHFAPLAKQLTEQEATIVGELAAVQGKPVDIGGYYRSNP
ELTSQVMRPSATFNAALAALNA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccttcgaagatcatctacaccttcaccgacgaagctccggcccttgctacc
tattcgcttctgcccattgtagaagcctttgccgcatcggctgacatctccgttgaaacc
cgcgacatctctcttgctggacggatcctggcaagctttgctgaccgcctggacgccgac
aagcgcatcgatgacgacctggccaagctggccgagctgaccctgcagccggacgccaac
atcatcaaactgccgaacatcagcgcctccgtcccccagctcaaggccgccatcgccgag
ctgcaggcccagggctacaacatccccgatttcccggaagatccgcagagcgaagaagac
aaggaagtgcgcgcacgctacgccaaggtgctgggcagcgcggtgaacccggtgctgcgc
gaaggcaactccgaccgccgcgcaccggccgcggtcaaggcctatgcgcgcaagcacccg
cacagtatgggcaagtggagcatggcttcgcagtcccacgccgactacatgcgcggcggc
gactttttctccagcgagcagtcgatcaccatggccaaggccggtgacgtgcgcatcgag
ttcgtcggcaaggacggcaaggtcgaggtcaagaagcaactggccctgcaggaaggcgaa
gtgttcgacagcatgttcatgagctgccgcaagctgcgtgacttcttcgagaagaccctg
caggactgcaaggaaaccggcgtgatgtggtccctgcacgtcaaggcgaccatgatgaag
gtctcccacccgatcgtcttcggccacgccgtcagcgtttactacaaggacgtgttcgac
aagtacggcgagctgttcaaggagctgggcgtcaacccgaacaacggcatcagcagtgtc
tacgacaaaatcaaggccctgcccgcttcgcagcaggaagagatcctgcacgacatccac
gaggtctacagccatcgcccggaaatggccatggtcgactcggtcaagggcatcaccaac
ctgcacatcccgagcgacgtgatcgtcgacgcctcgatgccggcgatgatccgcaactcc
ggccagatgtggggcaaggacggcaagcagaaagacaccaaggcggtcatgcctgagagc
acctatgcgcgcatctatcaggaaatgatcaacttctgcaaaaccaacggtgcgttcgac
ccgaccaccatgggcagcgtgccgaacgtcggcctgatggcgcagaaggccgaggaatac
ggctcccacgacaagaccttcgaaatgaccgctgacggcaccatgcgcgtcgtcgctgcc
gacggcaccgtgctgatgcagcaccaggtcgaagccggcgacatctggcgcgcctgccag
accaaggacgcgccgatccgcgactgggtcaagctggccgttacccgcgcccgtcagtcc
aacaccccggcgatcttctggctggacccggagcgcgctcacgatcgcgagctgcagaag
aaggtcgagctgtacctcaaggaccacgacctgactggcctggacatccgcatgatgggc
tacaacgaagccatccgcgtatccatggagcgcatgattcgtggcctggacaccatctcg
gtgaccggcaacgtactgcgtgactacctgaccgacctgttcccgatcatggagctgggt
acctcggccaagatgctgtccatcgttccgctgatggctggcggcggcatgtacgagacc
ggtgccggcggctcggcacccaagcacgtgcagcagctggtcgaagagaactacctgcgc
tgggattccctgggcgagttcctggccctggccgtgtcgctggaagaaaccggcatcaag
accaacaacgccaaggccaaggtactgggcaagaccctggatcaggccaccggcaagctg
ctggacaacaacaagtccccggcgcgcaaggtgggtgagatcgacaaccgcggcagccac
ttctacctggcgctgtactgggcccaggccctggccgagcagaatgacgatgccgagctg
aaggctcacttcgccccgctggccaagcagctgaccgagcaggaagcgaccatcgttggc
gaactggctgccgtacagggcaagccggtcgacatcggcggctactaccgctccaacccc
gagctgaccagccaggtgatgcgccccagcgccaccttcaacgcagccctggctgcgctg
aatgcctga
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