Prevotella melaninogenica: HMPREF0659_A6205
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Entry
HMPREF0659_A6205 CDS
T01286
Name
(GenBank) D-ala D-ala ligase N-terminal domain protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pmz
Prevotella melaninogenica
Pathway
pmz00470
D-Amino acid metabolism
pmz00550
Peptidoglycan biosynthesis
pmz01100
Metabolic pathways
pmz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pmz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF0659_A6205
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF0659_A6205
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HMPREF0659_A6205
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmz01011
]
HMPREF0659_A6205
Enzymes [BR:
pmz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HMPREF0659_A6205
Peptidoglycan biosynthesis and degradation proteins [BR:
pmz01011
]
Precursor biosynthesis
Amino acid ligase
HMPREF0659_A6205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
ADK95328
LinkDB
All DBs
Position
I:complement(1519515..1520513)
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AA seq
332 aa
AA seq
DB search
MKDSKRTIAIVCGGDSSEHDVSMRSGQGLYSFFDKERYNIYIVDVKGIDWNVELPDGSLA
PIDKNDFSFVMNGERVEFDYAYITIHGQPGENGVMQGYFDLIQIPYSTGGVLVEALTFDK
YVLNNYLRGFGIKVADSILLRRGEEYDEAEIEKRLGMPCFVKPAADGSSFGVSKVKNIDQ
LAPALRVAFMQSDEVMIEAFMDGMEISQGVYKTKDKAVVFPATEVVTSNEFFDYNAKYNG
QVEEITPARMSDETAKRVAAETSCIYDILHANGIIRIDYIISKDKDGKDVINMLEINTTP
GMTVTSFIPQQVRAAGLDIKNVLSDIVENQFK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaagattcaaagcgtacaatcgctatcgtctgtggtggcgattcttcagaacatgat
gtttctatgcgttcaggacagggattatactctttctttgacaaggagcgttacaatata
tatatagttgatgtaaagggtatcgattggaatgtagaattgcctgatggtagtttggca
ccaattgataagaatgacttctcatttgtcatgaacggtgagcgtgtagaattcgattat
gcttatattacaatccatggtcagcctggtgagaacggcgtgatgcaaggttactttgat
cttatccaaataccatactcaacaggcggcgtgttggttgaggcattgacctttgataag
tatgttcttaataactatctgcgtggctttggaatcaaggttgccgatagtattctgctt
cgtcgtggtgaagaatatgatgaggctgagattgagaaacgacttggcatgccttgcttt
gtgaagccagcggctgatggtagtagctttggtgtatcaaaggtgaagaatattgatcag
cttgcaccagctcttcgtgttgcttttatgcagagcgatgaggttatgattgaggctttc
atggacggtatggaaatctctcagggtgtttataagacaaaggataaggcggttgtcttc
ccagctaccgaggttgttacaagcaatgagttctttgactataacgctaagtacaatggt
caggtagaggagattacacctgctcgtatgtcagatgagaccgctaagcgtgttgcagct
gagacaagttgtatctatgatattctgcatgctaatggtatcattcgtatcgactatatt
atctcaaaggataaggatggtaaggatgttatcaatatgcttgaaatcaataccacacca
ggtatgaccgtcaccagctttattccacagcaggtacgtgcagcaggcttagatattaag
aacgttctgagtgatattgttgagaatcaatttaagtaa
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