Polaromonas naphthalenivorans: Pnap_3415
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Entry
Pnap_3415 CDS
T00459
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pna
Polaromonas naphthalenivorans
Pathway
pna00470
D-Amino acid metabolism
pna00550
Peptidoglycan biosynthesis
pna01100
Metabolic pathways
pna01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pna00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pnap_3415
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pnap_3415
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Pnap_3415
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pna01011
]
Pnap_3415
Enzymes [BR:
pna01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Pnap_3415
Peptidoglycan biosynthesis and degradation proteins [BR:
pna01011
]
Precursor biosynthesis
Amino acid ligase
Pnap_3415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATPgrasp_ST
ATP-grasp_4
TTL
RimK
GARS_A
CPSase_L_D2
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
ABM38712
UniProt:
A1VST4
LinkDB
All DBs
Position
complement(3620734..3621711)
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AA seq
325 aa
AA seq
DB search
MSPNPSSFGKVAVLMGGRSAEREISLMSGSGVVQALRSQGIDAHAFDPAERDLGELKTGG
FARCFIALHGRFGEDGTVQGALELLGIPYTGSGVMASSMAIDKVMTKRLLLSESLPTPRY
VLLRRGGYSPAQVDAIVDTLGLPLIVKPAREGSSLGLSKVTERAAMAAAVALAEKMDADI
LCEQFISGDEVTCPVLGTGEQARALPVIRIVAPEGNYDYQNKYFTDTTQYLVPCGLPAGE
EAAIQQLVLQAFRTLNCRGWARADVMIDQATRKPYLLEINTSPGMTGHSLVPMSARAAGI
SYEALCVEVLKTALLDHQPRDGSLP
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgaatccctccagttttggcaaggtcgccgtcctcatgggcgggcgctccgcc
gagcgtgaaatttcgctgatgtcaggaagcggcgtggtgcaggcgctgcgctcgcaaggc
attgatgcccatgccttcgatccggccgagcgcgacctgggcgagctgaaaacgggcggc
tttgcgcgctgtttcatcgcgctgcatggccgcttcggcgaagacggcacggtgcagggc
gcgctcgaactgctcggcattccctacaccggctcgggcgtcatggcgtcgagcatggcg
attgacaaggtcatgaccaagcgcctgctgctgtccgaaagcctgcccacgccgcgctat
gtgctgctgcgccggggcggctatagcccggcacaggtcgatgccatcgtcgatacgctg
ggcttgccgctgatcgtcaagcccgcgcgcgaaggctcatcgctgggcctgagcaaggtc
accgaacgagctgccatggccgcagccgtcgcgctggccgaaaagatggatgccgacatt
ctctgcgagcagttcatcagcggcgacgaagtgacctgcccggtgctgggcaccggcgag
caggcgcgggcgctgccggtgatccgcatcgtggcgcccgagggcaactacgactaccag
aacaaatacttcaccgacaccacgcaatacctggtgccctgcgggctgcccgccggcgag
gaagccgccatccagcaactggtgctgcaggcctttcgcacgctcaactgccgtggctgg
gcacgcgccgatgtgatgatcgaccaggccacgcgcaagccctacctgctggagatcaat
acctcgcccggcatgaccgggcactcgctggtgccgatgtccgcacgggcggccggcatt
tcctatgaagcgctgtgcgttgaagtgctgaaaaccgcattgctcgaccaccagccccgg
gatggaagcctgccgtga
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