Polynucleobacter necessarius: Pnec_0183
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Entry
Pnec_0183 CDS
T00683
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pne
Polynucleobacter necessarius
Pathway
pne00470
D-Amino acid metabolism
pne00550
Peptidoglycan biosynthesis
pne01100
Metabolic pathways
pne01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pnec_0183
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pnec_0183
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Pnec_0183
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pne01011
]
Pnec_0183
Enzymes [BR:
pne01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Pnec_0183
Peptidoglycan biosynthesis and degradation proteins [BR:
pne01011
]
Precursor biosynthesis
Amino acid ligase
Pnec_0183
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATPgrasp_ST
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
TTL
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ACB43488
UniProt:
B1XT11
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All DBs
Position
164515..165528
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AA seq
337 aa
AA seq
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MFNVGANLSSWGDRVKSSLAGMDLKSLGRVGVLLGGKSGEREISLMSGNGVLEALRSKGV
DAHAFDAGLRCPTELVKEKFDRIFISLHGRFGEDGTIQGLLELLGLPYTGSAVLASALAI
DKIVTKQVWISNGLATPEYEELTATSDWNAVVQHLGLPLIVKPAHEGSSLGLTKVKSVEE
LPAAYKLAAGLDKKVIAETCIIGDELTCPLVGQGKTAEALPVIKIIPPQANYDFHNKYFS
DETQYLCPTGLAPEVNAAVQTLALAAYKALGCRTWGRADVMLDQKTGKPYLLEMNTSPGM
TSHSLVPMAAKAAGIEYADLVLWLLSQTLQQKEGATT
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgtcggtgctaatttgagctcctggggtgatcgtgtgaagtccagcttggcc
ggcatggatcttaagtctttaggtcgtgttggggtactgctcgggggtaaatctggtgag
agagaaatttctctcatgtctggcaatggcgttttggaagcgctgcgttcaaaaggcgtc
gatgctcatgcctttgatgctggcttgcgctgtccaactgagttagtcaaagaaaaattt
gatcgtatttttatttccttacatggtcgctttggtgaggatggaactattcaagggtta
ctggagttattgggtttgccttatactggcagtgctgtattggcttctgctttagcaatc
gacaaaattgtcactaagcaagtttggattagcaatggtctcgctactcctgagtatgaa
gaattgactgcgacaagtgattggaatgcagtcgttcaacacttaggcttgccattaatt
gtgaagcctgcgcatgaaggttcctctttaggtttaaccaaagttaagtcagtcgaagaa
ttgccagctgcttacaagcttgccgctggtttggataaaaaagtaattgcagaaacctgc
attattggtgatgagctcacttgcccattggtcgggcagggtaaaacagctgaagcgttg
cccgtgatcaaaataattccgccacaagcaaattacgattttcataataagtacttctct
gatgaaactcagtacttatgcccaactggacttgcgccagaagtgaatgccgcagtgcaa
acattggccttggcagcatataaagcattgggttgtcgtacatggggtcgagctgacgtc
atgttggatcaaaaaactggcaaaccttatttgttggagatgaatacttctcctggtatg
acatcccattcattggtgccaatggctgctaaagccgctggtattgagtatgcggattta
gtgctgtggttattaagtcaaacattgcagcaaaaagagggcgccactacatga
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