Pseudoalteromonas nigrifaciens: PNIG_a3402
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Entry
PNIG_a3402 CDS
T05271
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png00250
Alanine, aspartate and glutamate metabolism
png00310
Lysine degradation
png00350
Tyrosine metabolism
png00650
Butanoate metabolism
png00760
Nicotinate and nicotinamide metabolism
png01100
Metabolic pathways
png01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
png00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PNIG_a3402 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PNIG_a3402 (gabD)
00310 Lysine degradation
PNIG_a3402 (gabD)
00350 Tyrosine metabolism
PNIG_a3402 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
PNIG_a3402 (gabD)
Enzymes [BR:
png01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
PNIG_a3402 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
PNIG_a3402 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
PNIG_a3402 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
ASM55301
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All DBs
Position
I:complement(3110329..3111867)
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AA seq
512 aa
AA seq
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MLPVGGSLPRADLSKKLALALCHALKANTLNVIWRFILSNLIFSDSFINGEFYKTDTHFS
VDDPATEKSIVDVSDIDEQGVNNAIVAAQSAFVKLKATNATQRSETLMRWYELVIKHKQT
LAELMTKEQGKPLKEALGEIDYGAGFIKWFAEEAKRSYGDVIPATDNSHRLTSFKQAVGV
VAGITPWNFPVAMITRKVAPAYAAGCSFILKPSEHTPLCAIALAYLADQAGFEKGAFNVL
VSQNAKKVGKILTDSEIVRKFTFTGSTGVGKQLLAQCAGTIKRTSMELGGNAPFIIFDNA
DLDAAIEGLMAAKFRNSGQACVAANRIFIQRNIIDAVLNKLTPKVAALKVGNGFTADVDI
GPLIYPKAKEKVQQLVQDALDKGAVLIGDNSDLGGSFQNPLIVNNVTTDMDIYHEEVFGP
VLTIIPFDDESEVLTLANDVPYGLAAYFYSQNIKQVYRISEGLEFGMIGVNEGVISNPVA
PFGGVKQSGLGREGGHQGLNEYLEEKYVCIKI
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
gtgttacccgtaggcgggagtttacctcgcgcagatttatctaaaaagttagccttggct
ctatgtcacgcattaaaagctaacaccttaaacgtaatttggaggtttattttgagtaat
cttattttttctgactcgtttattaatggtgaattttataaaacagacacacactttagt
gttgatgatcctgctaccgaaaaaagcattgttgatgtaagcgatattgatgagcagggt
gtaaataatgcaatagttgctgctcaaagcgcatttgttaaattaaaagcaaccaatgct
acgcagcgaagcgaaaccttgatgcgctggtatgagctagttataaaacacaagcaaacg
cttgcagagttaatgaccaaagagcaaggtaaaccacttaaagaagcattgggcgaaatt
gattacggcgcaggctttataaaatggtttgccgaggaagctaagcgcagctatggcgat
gttatacctgctaccgacaatagccatagattaaccagctttaagcaggctgtaggagtt
gttgcagggatcacgccatggaattttcctgttgctatgattacgcgtaaagttgccccc
gcctatgcagccggttgtagttttatattaaaaccttcagagcacaccccattatgcgct
attgcacttgcttatttagccgatcaagcagggtttgaaaaaggggcatttaacgtctta
gtatcgcaaaatgctaaaaaagtaggaaaaatactaaccgactctgagatagtgcgtaag
tttacttttaccggatcaacgggggtaggcaagcagttattagcgcaatgcgcaggtact
attaagcgcacttctatggagcttggaggaaacgcacctttcattatttttgataatgca
gacctcgatgcagctattgaggggttaatggctgctaagtttagaaatagtgggcaagct
tgtgttgctgcaaaccgtatctttattcagcgtaatattattgatgcggtactaaataaa
ctaacccctaaggtggctgctttaaaagtcggtaatggctttacagcagatgttgatatc
ggcccgcttatttaccctaaggcaaaagaaaaagtacagcagctagtacaagacgcacta
gataaaggggcagtattgattggtgataacagtgatttaggtggcagctttcaaaacccg
ttgattgtaaataacgtcactaccgacatggatatttaccatgaagaagtatttggccca
gtattaacaattattccttttgatgatgaaagcgaagtacttaccctagcaaacgacgta
ccttacggcttagccgcttatttttacagccaaaatattaagcaggtttatcgcattagc
gaaggtcttgagtttggcatgattggtgtaaacgaaggcgttatttctaaccctgtagcg
ccatttggtggtgttaagcaatcgggccttggccgtgaaggggggcaccaagggttaaat
gagtacctagaagaaaaatacgtgtgtattaaaatttaa
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