Paenibacillus naphthalenovorans: IJ22_42710
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Entry
IJ22_42710 CDS
T04167
Name
(GenBank) peptidase M15
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pnp
Paenibacillus naphthalenovorans
Pathway
pnp00550
Peptidoglycan biosynthesis
pnp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IJ22_42710
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnp01002
]
IJ22_42710
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnp01011
]
IJ22_42710
Enzymes [BR:
pnp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IJ22_42710
Peptidases and inhibitors [BR:
pnp01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
IJ22_42710
Peptidoglycan biosynthesis and degradation proteins [BR:
pnp01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
IJ22_42710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ALS24564
UniProt:
A0A0U2W7Q0
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All DBs
Position
complement(4261147..4262433)
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AA seq
428 aa
AA seq
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MFRYVKKICSVVAVTLLLNASLTLVQPTPVQAADTPVDLKLNAKSAILMEASTGQILYEY
NADEALPPASMAKMMTEYLVMEAIKSGKIDKTTMVTTSKYASEVIGSQILLAEGEQATVD
DMFSALSIYSANDAAVALAEHIGGTEENFAKMMNEKAKEFGLSEQAHFINATGLGRADLG
KYAPQNLQGETLLSARDAAIIAYNILKDHKEVLEYTKIPAKKFRERDTTPMINWNWMLWD
NRNTTNFKRYAYEGLDGLKTGSTNEAGYCFTGTAERNGMRLISVVMGTETEPSRFEETRK
VLDYGFTNFELKQVLGAKAEIDSMKTVNIKKGVKTQVPVVTETAVSIVAKKGAAADQFTI
TAAPADESKLIAPITQGQVLGTVKVSYNGNEQTANLVAAEDVEQGSWIRLFFRAIKDFFV
DTVKGVTS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
ttgtttcgttatgttaaaaaaatttgttctgtcgtagctgtcaccctcttattaaacgcg
tcacttaccctggttcagccaacaccggttcaagctgcggatacccctgtggatttaaaa
ctgaatgccaaatccgctatattgatggaagcgagcacaggccagattttatatgaatat
aacgcagatgaggcactacctcccgcaagtatggctaagatgatgacggaatatttagta
atggaggcaattaagtctggcaaaatcgataaaacaacgatggttaccaccagtaaatac
gcgtcggaagtgataggttcgcaaattctgttagctgagggagagcaagctacggtagat
gatatgttctccgcattgtcgatttactcggcaaacgatgctgcagtagcgctagctgaa
catataggcgggacagaagaaaatttcgccaaaatgatgaatgaaaaagcaaaagaattc
ggattgtcggaacaagctcattttattaatgcgacgggattgggacgggccgaccttggt
aagtatgctccccagaatttgcagggggaaacgctcctttctgcaagagatgcagctatc
atcgcctataatatcttaaaggatcataaggaagtactggaatatacgaaaatcccggcc
aagaaattccgtgagagagacacgacacctatgattaactggaactggatgctttgggac
aaccggaacacgaccaattttaagcgatatgcttatgaaggcctcgacggtttaaaaaca
ggaagcacgaatgaagccggctattgctttaccggaacagcggaacgtaatggaatgagg
ctgatcagtgtcgtgatgggaacggagacggagccaagccggtttgaagagacccgcaaa
gtgcttgactacggtttcacgaactttgaactgaaacaggtcctgggtgcgaaagctgaa
atagattccatgaaaacagtgaatattaaaaaaggtgtgaaaacacaagtgccggtcgtc
acggaaactgcagtttccatcgttgccaaaaaaggcgccgcggccgatcaatttacgatt
acagcggcaccggcagatgaaagtaagcttatcgccccgattacacagggtcaggtgctt
gggacggtcaaggtttcctataacggaaatgaacaaacagctaatttggtggcagccgag
gatgtagagcaaggaagctggatccggctgttcttcagagcgatcaaggacttttttgta
gatacggtcaaaggtgtcacaagctga
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