Paenibacillus naphthalenovorans: IJ22_45760
Help
Entry
IJ22_45760 CDS
T04167
Name
(GenBank) subunit beta of DNA-directed RNA polymerase
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pnp
Paenibacillus naphthalenovorans
Pathway
pnp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pnp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IJ22_45760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnp03021
]
IJ22_45760
03400 DNA repair and recombination proteins [BR:
pnp03400
]
IJ22_45760
Enzymes [BR:
pnp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IJ22_45760
Transcription machinery [BR:
pnp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IJ22_45760
DNA repair and recombination proteins [BR:
pnp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IJ22_45760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ALS24853
UniProt:
A0A0U2WBJ6
LinkDB
All DBs
Position
4564909..4568463
Genome browser
AA seq
1184 aa
AA seq
DB search
MRGESKLAGHLVQLGRRKRRSYARIHEVLEVPNLIEIQQKSYQWFLDEGLREMFQDISPI
QDFTGNLVLEFIDYSLGEPKYSVDESKERDVTFAAPLRVKVRLINKETGEVKEQEVFMGD
FPLMTETGTFIINGAERVIVSQLVRSPSVYFSTKVDKNGKKAYTATVIPNRGAWLELETD
AKDIIYVRIDRTRKIPVTVLLRALGFGTDAEIIDLLGDDEYIRNTLDKDNTDSTDKALIE
IYERLRPGEPPTLDNARSLLIARFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLV
NPETGEIIAEAGQQLDRRLLDTIIPYLEDNVGFKEYSVANGVTETDKITLQHINVYSPIE
DGKVVKVIANGKIDKSVKNITPADIIASINYFINLLHGIGSTDDIDHLGNRRLRSVGELL
QNQFRIGLSRMERVVRERMSIQDVNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNP
LAELTHKRRLSALGPGGLTRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLSTFAR
VNEFGFIEAPYRRVDPNTGIVTDEIAYLTADEEDNYVVAQANAELTEDGRFANDNVIVRY
KDDILTLPKERVDYMDVSPKQVVSVATALIPFLENDDSNRALMGSNMQRQAVPLLIPKAP
LVGTGMEHKAAKDSGVCVVSKVNGVVERVTANEIWVRRQEVVDGRLVNGDIVKHKLHKFL
RSNQGTCINQRPICHKGEQVRVGDILADGPSTEMGELALGRNVVVAFMTWEGYNYEDAIL
LSEKLVKEDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALKNLDERGIIRVGAEI
AAGDILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGTDGIVVDVKVFTRE
NGDELPPGVNQLVRVYIAQKRKISEGDKMAGRHGNKGVIARILPEEDMPFLPDGTPVEVV
LNPLGVPSRMNIGQVLEVHLGMAAKYLGIHTATPVFDGANEYDVFDTMEEAGMQRNGKTI
LYDGRTGEPFEREVTVGVMYMIKLAHMVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFG
EMEVWALEAYGAAYTLQEILTVKSDDVVGRVKTYESIVKGENVPEPGVPESFKVLIKELQ
SLGMDVKILSENEEEIEMKEIDDEDEVTSDKLNLNLEGAEMGVE
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtgaatctaagttggcgggacatcttgttcaattaggtcgacgtaaacgcagg
tcgtacgcgcggattcatgaggtgttggaagttccaaacctgattgaaatccaacaaaaa
tcatatcagtggtttttggatgaagggttgcgtgaaatgtttcaagatatttccccaatc
caagattttacggggaatttggtgttggaatttatcgactacagcttgggagagccaaag
tattcagtggatgaatccaaagaacgcgacgtcaccttcgctgcaccgcttcgtgtgaaa
gtacgtttgatcaataaagagactggcgaagtcaaggagcaggaagtctttatgggcgat
ttccctctgatgaccgaaacgggtacttttattatcaacggcgctgaacgggttattgtc
agtcagctggttcgttccccgagcgtctattttagtacgaaagtcgataaaaacggtaaa
aaggcttataccgctaccgtgattccgaaccgcggcgcttggcttgaattggaaacggat
gcgaaggatatcatctatgtgcgtattgaccgtacaagaaaaatccctgtaaccgtactg
cttcgtgcactcggcttcggtaccgacgcggaaatcatagacctgcttggtgacgatgaa
tatatccgcaatacgttggacaaggataacaccgattcgacggacaaggcgttgattgaa
atttacgagcgtcttcgcccgggcgagccgccgacgctggataatgcgagaagcttgctg
atcgccagattcttcgatccgaagcgttacgatcttgccaatgttggacggtacaaaatc
aacaaaaagctgcatatcaaaaatcgtctgttcaatcaacgtctggctgagacccttgtt
aatccggaaacaggcgagattattgcagaagctggacaacagcttgaccgccgtttgctc
gacacgattattccttatctggaagacaacgtcggcttcaaagaatattcggtcgctaac
ggcgtaactgaaacagataagattacgctgcagcacattaacgtctactccccgattgaa
gacgggaaagtggttaaagtcatcgccaacgggaaaattgacaagtcggtgaagaacatt
acgccggctgatatcattgcatcgatcaactatttcattaacttgctgcatgggatcggc
agcaccgatgatatcgatcatctgggtaaccgtcgcttgcgttccgtgggagagcttttg
cagaaccagttccgcattggcctgtcccggatggagcgcgtggtacgcgagcggatgtcg
attcaggatgtgaacacgatcaccccgcagcaattgatcaatatacgtccggtcatcgct
tcgatcaaggagttcttcggaagctcccagctgtcgcagtttatggaccagacgaacccg
cttgccgaactgacgcacaaacgccgcctgtccgctcttggacccggtggtttgacgcgg
gaacgcgcaggttttgaagtgcgggacgtccatcactcccactatgggcggatgtgtccg
attgagacgccggaaggaccgaacatcggtttgattaactcactttccacgttcgcgcgt
gtgaatgaattcggctttattgaagcgccctaccggcgtgttgacccgaataccggcata
gttacggatgagatcgcttatttgacggccgatgaagaagataattacgtggtcgcgcag
gcgaatgccgagttgaccgaggacggcagatttgcgaatgataacgtcattgtccgttac
aaggacgatattctgacgcttcctaaagagcgtgtcgattacatggacgtttcccctaag
caagttgtatcggtagcgacggcgcttattccatttttggaaaacgacgactccaaccgt
gctctcatgggttcgaacatgcagcgtcaagccgttccgcttcttatccctaaggcgccg
cttgtcggtacggggatggagcataaggcggccaaggactcgggtgtatgcgtcgtttcc
aaggtgaacggtgtggtagaacgggtgacggctaacgagatctgggtacgccgtcaggaa
gtagtggacggccgcctggtgaacggagacatcgttaaacataaattgcacaagtttttg
cgctccaatcaaggaacatgtattaaccaacgtccgatttgccataaaggcgagcaagtg
cgcgtaggagatatcctcgccgatggtccgtcgacggagatgggcgagcttgcgctcggg
cggaacgtagtggttgcctttatgacatgggaaggctacaactacgaggatgcgatattg
cttagtgaaaaactggtgaaggaagacgtctatacttccattcacattgaagaatatgag
tctgaagcccgggatacgaagctcggaccggaggaaatcacccgtgatattccgaacgtc
ggggaagatgcgctgaaaaatctcgatgagcgcggaattatccgcgtcggtgccgagatc
gcggcaggcgacattctggtgggcaaagtaacgccaaaaggggttacggagctgaccgcg
gaagaacgtttgcttcatgcgattttcggtgaaaaagcccgtgaagttcgcgatacttcg
cttcgtgtgccgcacggtaccgatggtatcgtagtcgacgtgaaagtatttacccgtgag
aacggcgacgaactgcctcctggcgtaaaccagctggtgcgcgtctacatcgcccagaag
cggaaaatttccgaaggcgacaagatggcgggacgtcacggaaacaaaggggttatcgca
cggattttaccggaagaggacatgccgttcctgccggacggcacgccggttgaagttgtg
ctgaacccgcttggcgttccttcccggatgaacatcggacaggtgctggaagttcacttg
gggatggctgccaagtatctcggtatccatacggcaacgccggtattcgacggtgctaat
gaatacgacgtgttcgatacgatggaagaggccggcatgcagcgtaacggcaagacgatc
ctgtacgacggcagaaccggtgaaccgtttgagcgagaggtaacggtaggcgtcatgtat
atgatcaagctggctcacatggtcgatgataaaatccatgcgcgttcgacagggccgtac
tcgctcgttacgcagcagccgctgggcggtaaagctcagttcggcggacagcggtttggc
gagatggaggtatgggcgctcgaggcttatggtgcagcctataccctgcaggagattttg
actgtgaaatccgacgacgtggtaggacgcgtcaaaacgtatgagtcgattgttaaaggt
gagaatgttccggagcctggcgtaccggaatccttcaaggtattgatcaaagagcttcaa
agcttgggtatggatgtgaaaatcttgtccgagaatgaagaagagatcgaaatgaaggaa
atcgacgatgaggatgaggtaacaagcgataagcttaaccttaaccttgaaggcgcggaa
atgggagtcgagtaa
DBGET
integrated database retrieval system
