Pseudodesulfovibrio nedwellii: SYK_17450
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Entry
SYK_17450 CDS
T09024
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
pnw
Pseudodesulfovibrio nedwellii
Pathway
pnw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pnw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SYK_17450 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pnw01007
]
SYK_17450 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnw03016
]
SYK_17450 (alaS)
Enzymes [BR:
pnw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
SYK_17450 (alaS)
Amino acid related enzymes [BR:
pnw01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SYK_17450 (alaS)
Transfer RNA biogenesis [BR:
pnw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SYK_17450 (alaS)
Prokaryotic type
SYK_17450 (alaS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Prefoldin_2
HydF_dimer
Phage_GP20
CLZ
TMF_DNA_bd
Motif
Other DBs
NCBI-ProteinID:
BDQ37385
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All DBs
Position
1906263..1908902
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AA seq
879 aa
AA seq
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MKANEIRQRFLEYFEKNSHAIVESSPLTPKDDPSLLFTNAGMVQFKKLFLGQEKRDYNRA
TTSQKCLRVGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEDAIKFCWEFLTEELKLD
KERLYITIYKDDDEAGELWKKIAGVPEERIFKLGEKDNFWSMGDTGPCGPCSEVHFDQGE
EVGCGPNCGIGKCDCDRYLEIWNLVFMQYDQAEDGTRTDLPRPSIDTGMGLERIAAVAQG
VASNYETDLFQSIIQYTADLAGVKYRQSEEIDTALQVIADHSRAIAFLIPDQVLPSNEGR
GYILRRLIRRAYRFGKLMGLKGSFLWKTASKVVDDMGGHYKELEETRDFMIEVVKGEEEG
FANTLDKGLEMLEEELAELKKVKASIVPGETTFKLYDTYGFPIDIVRDIAEQHGMGVDET
EFDKFMQEQKKRSKAAWKGSGEKDIASTFQTLLEQEVTSEFSGYETMADQSDIAYLLTLN
GKIVDTLPDGSSGWIVAKSTPFYGESGGQTGDTGSIAASGGKADVLETVKPSQKLTAHRV
TVTEGTFSTGDTAFFNVDRSQRLATMRNHTVTHLLHAALQKVLGDHAKQAGSLVGPDRLR
FDFTHIKGLSHDELAEVEAIVNQNILDAIPVDRSVMSIKEAQTKGATALFGEKYGDTVSI
IEVPGVSMEFCGGTHLDNTGIAGTFIITAEAGVAAGIRRIEAATGHNAVAYLNERREAVA
EAGAMLKAQPADLPKKVKDLQKQVKDMAKEMKSLQAKLASGAGSDMMSKIEDINGVKVLA
VELEAPNMGVMLEQMDALRSKIDSGVICLVAGHDEGKVSVALAVTKDLHNRFKAGNLIKQ
VAGEVGGGGGGRPDLARAGGSNAAGIPNAIAKIKELIAE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccaacgaaatccgtcaacggttccttgaatacttcgagaagaacagccacgcc
atagtggagtcttcaccgctgacccccaaagacgacccgagcctgctcttcaccaatgca
ggcatggtccagttcaagaaactttttctgggccaggaaaaacgtgactacaaccgcgct
accacttcgcagaaatgtctgcgcgtgggcggcaagcacaacgacttggagaacgtgggt
cgcaccgcacgccaccacacatttttcgaaatgctcggcaacttctcctttggcgattac
ttcaaggaagacgccatcaagttctgttgggaattcctcaccgaagaactgaagctcgac
aaagaacgcctctatattactatatataaagatgacgacgaagcaggcgaactttggaag
aaaatcgcaggtgtccctgaagagcgtattttcaaactgggcgaaaaggataacttctgg
tccatgggcgacaccggcccctgcggtccctgctccgaagtccactttgaccaaggcgaa
gaagttggctgcggtccgaattgcggtatcggcaaatgtgactgtgaccgctatctggaa
atatggaacctcgtgttcatgcaatacgatcaagccgaagacggcactcgcaccgatctg
ccccgcccgtccatcgacacaggcatgggccttgagcgtatcgctgctgtggcacagggc
gtagcctcgaactatgagaccgacctgttccagtccatcatccagtacaccgctgatctt
gctggtgtgaaataccgccagtccgaagagatcgacaccgcgcttcaggtcattgccgac
cactcacgcgccattgccttcttgatcccggatcaggttctcccgtccaatgaaggacgt
ggatatattttgcgccgtctcattcgccgtgcctatcgcttcggcaaactcatgggcctt
aagggctccttcctgtggaaaaccgcttccaaagtcgttgacgacatgggcggacactac
aaggaactggaagaaacccgcgacttcatgatcgaagtagtcaaaggtgaagaagagggc
tttgccaataccttggacaaaggccttgaaatgctcgaagaggaactggctgaactgaaa
aaagtcaaggcctccatcgttcccggcgagaccactttcaaactttacgacacgtacggc
ttccccatcgacatcgtacgcgacatcgcagaacagcatggcatgggcgttgatgaaacc
gaattcgacaaattcatgcaggagcaaaaaaaacgctccaaagccgcatggaaaggctcc
ggcgaaaaagacatcgcttccaccttccagacactcctggaacaggaagtgacctctgaa
ttctccggctacgaaaccatggctgaccagtctgacatcgcctacctgctcactcttaat
ggcaaaattgtcgacactctgcccgatggctcgtccggctggatagtcgcgaagtccacg
ccgttctacggtgaatccggcggccagaccggagacactggctccattgctgcttccggc
ggcaaggctgacgttctcgaaaccgtgaaaccttcgcaaaaactgaccgctcacagggta
acagtaacagaagggacattttccacgggcgacacagcgttctttaacgttgatcgctcc
caacgtttggccaccatgcgtaaccacacggtaactcacctgctccatgccgccctgcaa
aaagttctgggcgaccatgcaaagcaggccggttcactagtcggcccggatcgtctgcgc
tttgacttcacgcacatcaaagggctgtctcatgacgaactcgctgaagtggaagccatc
gtaaaccaaaacattctcgacgccattccggtagaccgctcagttatgagcatcaaagaa
gctcagaccaagggcgcaaccgccctgttcggcgagaaatacggcgacaccgtatccatc
atcgaagttcctggcgtatccatggaattctgtggaggcacacatctggataataccggc
attgccggaacatttatcattactgccgaggccggagtggccgcaggtatccgccgcatt
gaggctgcgacaggccataatgctgtagcttatctcaacgaacgtcgcgaagccgttgcc
gaagccggagccatgctcaaggcccagcccgcagatctgcccaagaaggtcaaggacctc
caaaagcaagtcaaagatatggccaaggagatgaaatccttgcaggccaagctcgcatcc
ggcgcgggcagtgacatgatgagcaaaattgaagatatcaacggagtaaaagttctggct
gttgaactggaagccccaaacatgggtgtcatgctggaacagatggacgccttgcgctcc
aagattgattccggtgtcatctgcctcgtggcaggccatgacgaaggtaaggtctcggtc
gcacttgcagtgactaaagacctgcataaccggttcaaggctggcaacctgatcaaacag
gtagcaggcgaagtcggcggtggcggcggaggccgtcccgatctggctcgtgcaggcggc
tcaaacgctgcaggcataccgaacgccattgccaaaataaaagaactgatcgcagaataa
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