Paenibacillus odorifer: PODO_01520
Help
Entry
PODO_01520 CDS
T03326
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pod
Paenibacillus odorifer
Pathway
pod02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PODO_01520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pod02000
]
PODO_01520
Transporters [BR:
pod02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PODO_01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
SMC_N
AAA_16
RsgA_GTPase
nSTAND1
AAA_22
AAA_29
AAA_23
Rad17
AAA_25
AAA
NACHT
AAA_5
ATPase_2
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AIQ72062
LinkDB
All DBs
Position
336451..337494
Genome browser
AA seq
347 aa
AA seq
DB search
MNDYLKLQGVRKMFGNTCVLDNVDLEIREGELVTLLGPSGCGKSTLLRCIAGLSELDGGR
ILLENKDLGSLPPRKREVGMVFQSYALFPNLTVSQNIEYGMKMRGLSKSARHHRCAELLA
LVDLEDKRDVYPQSLSGGQQQRVALARSLAVQPKVLLLDEPLSALDAKIRKNLRAEIRDI
QKRFNMTTLFVTHDQEEALILSDRICIMNGGRIVQDGTPEGLYSAPRTEFVARFMGSYNV
LTRSEVMTLFRGIDSTKDRFAIRPEAVTLLHEGAGLHEVAAGLQLVDGIIKSVSVLGNIV
RCTVEVEDISLTVDLLNDGRWLRLVEGANVTLALNPSELLHLEREGA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattatctaaagctgcagggtgtacgcaaaatgtttgggaatacctgtgtgtta
gacaatgttgatttggagatccgtgaaggtgagcttgtgacactgctaggcccctccggt
tgtggaaaaagcacattgctacgctgcatagccggtctttcagagctggatggcggcaga
attcttttggaaaataaagatctgggaagtttgccgccccgtaagcgcgaggtaggaatg
gtgtttcagtcttatgccttgttccccaatctgacggtgagccaaaatatcgagtatgga
atgaaaatgcggggactatcgaaatcagcccgccatcatcgctgcgcggaattgctggca
ttggtcgatctggaggataaacgggatgtatatccgcagtccctctctggtggacagcag
cagcgggtagcgctggctcgttctctagcggtgcagcccaaagtattgctgctggatgaa
cccttaagcgcactagatgctaagatacgcaagaatttacgtgctgaaatccgtgatatt
caaaaaaggtttaacatgacgacactattcgtgacgcatgatcaggaggaagcactgatt
ctttctgaccgcatctgtattatgaatggtggccggattgtgcaggatggcacacctgag
gggttgtactccgcaccacgaacagagttcgttgcccggtttatgggcagttacaatgta
ttgacccgatcagaagtgatgacgttgttccgggggatagatagcacgaaggaccgattt
gctattcggcctgaggcggttacgctgctgcatgagggcgcgggacttcacgaggttgct
gccggactgcaactggtggatggcatcattaaatctgtctccgtattgggcaatattgtt
aggtgtacggtagaggtggaagacatttctttaacggttgatcttttaaatgacggacgc
tggctgaggctggtggaaggggctaacgtcaccttggctctgaacccttctgagctgctg
catctggaacgagagggagcgtaa
DBGET
integrated database retrieval system
