Paenibacillus odorifer: PODO_06655
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Entry
PODO_06655 CDS
T03326
Name
(GenBank) phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pod03019
]
PODO_06655
Messenger RNA biogenesis [BR:
pod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PODO_06655
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AIQ72958
UniProt:
A0A1R0XN90
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All DBs
Position
1488950..1489906
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AA seq
318 aa
AA seq
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MTQIKQLAPQDEFVGFYLLRELAIKQTNGTPPKDYFDIVLGDSTGQLSAKYWDASTTDKE
TFFPMALVKVRGIAHTYREKLQIKITKIRLVNDEDGVALTDFIRSAPIRPVDLIHTIKGV
MASISDPEIASIVSFCVGKVEEKLMHYPAAKTHHHAYFAGLAYHMVRMLEIGDFLCKQRP
FLNPDLMKAGIILHDIAKPEEMVSQLGIVSEYSVQGKLIGHISMASNWITEAAIRLDIDL
NSEKVMALQHLVLSHHNLGEWGSPVQPQTAEAVALHHIDAMDAKLQMVEDALDTTPETEE
WTPFIRGLENKAVYRLKI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaattaaacagctcgctccacaagatgaatttgttggcttttatcttttaaga
gagctggcaattaaacaaacgaacggcactcctccaaaagattattttgacatcgtcctg
ggggattccactggacaattatccgcgaaatattgggatgccagcacaactgataaagaa
actttttttcctatggcgcttgtgaaggtacgcgggattgctcatacttatcgtgagaaa
ttacaaataaaaattactaaaatcaggttggttaacgatgaggatggcgttgcacttacg
gatttcatccgttctgccccaattcgtccagtagaccttattcatacgattaaaggggtt
atggcaagtatttcggatccggaaattgcttcaattgtctctttttgtgtgggtaaagtg
gaagagaaattgatgcattatccggcagccaaaacacatcatcatgcttattttgccgga
cttgcttatcatatggtgcgtatgctggaaatcggtgattttctgtgcaagcagcgtccg
ttcttgaatccagatctaatgaaggccgggatcattctgcatgatatcgcgaagccggag
gagatggtctcccagcttgggattgtctcggaatatagcgttcagggcaaattaattggc
catatctcgatggcgtctaattggatcacggaagcggctatccgcttagatattgatttg
aattcggaaaaggttatggcgttacagcatctcgtattgtcacatcataatctgggcgaa
tgggggagtcctgttcagccacagacagctgaggcagtcgctctgcatcatatcgatgcg
atggatgcgaagctgcaaatggtggaggatgctttggataccacaccggagaccgaggaa
tggacaccgttcatcagaggtctagagaataaggctgtgtatcgtttgaagatttaa
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