Paenibacillus odorifer: PODO_25955
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Entry
PODO_25955 CDS
T03326
Name
(GenBank) alpha amylase
Organism
pod
Paenibacillus odorifer
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_25
Alpha-amylase
fn3
RGI_lyase
CBM_20
A_amylase_dom_C
AMPK1_CBM
Motif
Other DBs
NCBI-ProteinID:
AIQ76409
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Position
complement(5777108..5780167)
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AA seq
1019 aa
AA seq
DB search
MKRKLWYVPVLITSILLSTVINLFILAPQQADAASIGTINENDTIYQIMVDRFNDGDSSN
NATGAAIRYGENSEEDFRYMKGGDWQGVIDKLSYIKNMGYTAIWISPVAEPQMTNRENNG
SGKNTAYHGYNVKDPNAANPYFGTKEKLKELVDSAHAVGIKVVIDVVPNHIGDYMLGTQA
YYDIPSLQPAAPFNNPAWYHHNGDINWSLADGRYDQWAQDYLENHDLGGLDDIDFDVPAA
KKAVFDSIKGWFDYTGADGARVDAAKLMKPTDIGELQNYLGVNTFGENFDGNAEFVSRWV
GNNKEWGMLDFPMFFSVLNSFAYGQSFDSNIKSTLAQDSYYNGNANHMVTFIDNHDRNRF
LTEAGGSVDKLQNALTFIFTVRGTPVVFQGTEQNKGNGNGQIMTGGIADTWNRWSMVKRD
ANGNVLENYFNENASTYKHVAKLNEIRKNNPALRTGTQREMWSAQNLYAFSRRIDTGTNL
GQEVISVFSNKSSGSQTVTIPLRAESSLAVGTVLYNQLNTSDTVTVQSGGATGKQITVTV
GANAAKIYAKQQLPTDTVAPTVPTNVTATVQNASSALVSWTASTDNVGVTGYEIYRNGVK
VGTSATTSYTDNGLSASTTYDYTVKAMDAAGNLSLLSAIASVTTPAGNSVTIYYKQGYTS
PYIHYRPVGGTWTTSPGVAIPVSDVAGYNKITINIGSASQLEACFNNGSGTWDSNGGSNY
LFSAGTWTYTPTGNIQSGGPVTPTPTVTPTPSPTVTPTPTVTPTPTPTVTPTPTPTPTVS
PTSTPTPTLTPTPTPTPTPTPTATPTPTVTPTPTPTATPVGSTATIYYKNAAYSSSYIHY
KLDGSTVWTTSPGEQLQASAFTGYKAVTIQLGTAAGLTAAFNNGSGTWDNNGGNNYHFAA
GTWSMVNGNITAGEPQADSVTFRVTVPASTPVSGPVYLSGSFNSWNVADPNYQLTKGSDG
IYSITLSLPAGTAIQYKVTRGAWTNVEVNSNGSDLSNRTLTPSGGAQTVNLTVQRWKDL
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtaagttatggtacgtgcccgttctgattacatctattcttctttctactgtg
attaatttattcatcttagcgccacaacaggcagatgcggccagcatcggtacgattaac
gagaatgataccatttatcagattatggttgaccggtttaatgacggggactcttccaac
aatgctacgggagcggcaattcgctatggcgagaactctgaagaagatttccgttatatg
aaaggcggagattggcaaggggtgatcgacaagctgtcttatattaaaaatatgggctac
accgcgatctggatttccccagtggcggagccgcaaatgacgaatcgggagaacaatggc
agcggtaaaaatacagcgtatcacgggtacaatgttaaggaccctaacgcagccaatccc
tactttggtacaaaggagaagcttaaggagttagtggattccgcacatgcggttggcatc
aaggtagtgatcgacgttgtgccgaaccatatcggggattatatgctgggtacccaagcc
tactatgatatccctagtctgcagccagcagctccttttaataacccggcttggtatcac
cataatggagatatcaactggtctttggcagacggaagatacgatcaatgggcacaggat
tacttagaaaatcatgatctaggcggactggatgacattgacttcgatgtccctgccgct
aaaaaagccgtatttgattcgattaaaggctggtttgactatacaggagcagatggtgca
cgtgtagacgcagccaagctgatgaagccgactgatattggtgaactgcaaaattatctg
ggggttaatacctttggcgagaattttgacggcaatgctgaatttgtctcacgctgggtc
ggcaacaacaaggagtggggcatgcttgatttcccaatgttcttctccgttctaaatagc
ttcgcatatgggcagtcttttgactccaatattaaaagcaccttggcacaggattcctac
tacaacggaaatgccaatcacatggttacctttatcgacaatcatgaccgcaatcgtttt
ctcacagaagctggaggaagcgtagataagctgcagaacgctttgacttttatttttaca
gtgcgtggaacacccgtagtcttccaaggtacggaacagaacaaaggcaatggtaatgga
cagattatgacgggaggcatcgccgatacctggaaccgctggtcaatggtgaaacgggat
gcaaacggcaatgtattagagaattattttaatgagaatgccagcacctacaagcacgta
gccaaacttaatgagattcggaaaaataatccggcactccgtacaggcactcaacgtgaa
atgtggtctgcacagaacttatatgctttttcacgtcgtatcgacactggaactaatctg
gggcaggaagttatctccgtatttagtaataaatccagcggctcgcagaccgttaccatt
ccactgcgtgcagagagcagcttggcagtcgggacggttctttataaccagttgaacact
tcggatacggtaactgtacaatcgggtggagcaactggcaagcagatcactgtaaccgtg
ggtgcaaatgcagccaaaatttatgcaaaacaacagcttcctacagatacagtggctcca
actgtaccaactaacgtgaccgcaactgttcaaaatgcatccagtgctttagtaagctgg
accgcttccaccgacaatgtaggtgtgaccggatatgaaatttatcgcaacggcgtcaaa
gtgggtacatccgcaactacttcatatacggataacggattatccgccagtactacgtat
gactatacggtaaaagcaatggatgcagcaggcaatctatccctccttagcgcgattgct
tcagtgacaacaccagcggggaacagtgtcactatttactataagcagggctatacctcg
ccttatattcattatcgccctgtaggaggaacttggacgacatcaccaggtgtggcgata
cctgtctctgatgtagcaggctacaacaaaataacgattaatatcggctcagccagccag
cttgaagcttgctttaacaatggcagcggtacttgggacagtaacgggggcagcaactat
ttatttagtgccggcacctggacttatacaccaactggcaatattcaatcgggtggacca
gtgacgccgacaccaacggtaacaccgacaccatcaccaaccgtaacgcctacaccgacg
gtaacgccgacaccgacgccaaccgtaacgccaacaccgacaccgacgccaacggtatcg
ccaacgtcaacaccgacaccaacgctaacgccgacaccaacgccaacgccaacgccaacg
ccaacggcaactccgacaccgaccgtaacgcctacaccaacgccaacggcaacacctgtc
ggcagcacggcaacgatctattataagaatgcggcttatagcagctcttatatccattat
aagctcgatggttcaacggtctggacgacgtctccaggcgagcagctccaagcttctgct
tttacaggatataaggcggttacgattcagctgggcacggcagctgggctgaccgcagcc
tttaataatggcagtggcacatgggataacaatggcggcaataactatcattttgctgcg
ggcacctggagtatggtgaatggcaacatcaccgcaggagaaccacaagcggatagtgtt
acattccgagtaactgttcctgcgtctactcctgtgagtggtcccgtttatctctccggc
tctttcaatagctggaatgtggcagatccgaactaccaactgacgaagggcagtgatggt
atttactccatcacactaagtctaccggcgggaacagcaattcaatacaaagttacacga
ggcgcttggactaatgtggaggtgaattcgaatggatcggatctttccaatcgaaccctt
acgccatcaggcggtgcacaaaccgtaaatctgacggttcagcgctggaaggatctataa
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