Pontibacillus sp. HMF3514: GS400_13925
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Entry
GS400_13925 CDS
T06374
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pof
Pontibacillus sp. HMF3514
Pathway
pof03030
DNA replication
pof03430
Mismatch repair
pof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GS400_13925 (holA)
03430 Mismatch repair
GS400_13925 (holA)
03440 Homologous recombination
GS400_13925 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pof03032
]
GS400_13925 (holA)
03400 DNA repair and recombination proteins [BR:
pof03400
]
GS400_13925 (holA)
Enzymes [BR:
pof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GS400_13925 (holA)
DNA replication proteins [BR:
pof03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GS400_13925 (holA)
DNA repair and recombination proteins [BR:
pof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GS400_13925 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QHE53049
UniProt:
A0A6P1HIW1
LinkDB
All DBs
Position
complement(2691530..2692570)
Genome browser
AA seq
346 aa
AA seq
DB search
MVYFDALKKIKKKQFDPVYLIYGTESYLIQDLQQALVQNALSEDEHDVNLSVYDLEEMPI
QEVIMDAETFPFFGDRKLLLCKNPSFFKAKPDKVQVEHDLNVLQSYLEQPVDYSVIVFIA
PYEKVDERKKIIKQIKEVGQVIPCQSFKEYEMNDWIQSMAKELHINLESPALEIFIQENG
TNLMSIRNELEKMALYVGEGGTVTKEVAELLASHNPQASAFKLVDAVMNQNIQRAMLIYK
DLEKQNEEPIGLLALLASQFRLIFQSKLLKQKGYSQNQIAQQAKVAPFAVKMALKRERGF
TDKELSLIMQHLTEADAAIKQGKMDKTLAFEMLLYELINLKRSTSA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtttattttgatgcattaaagaaaatcaagaaaaaacagtttgatcctgtttatttg
atatatggaacggagtcttatttgatccaagaccttcaacaagcactcgtgcaaaacgca
ttatcagaggacgagcacgatgtgaatttatcggtttatgaccttgaagaaatgccaata
caagaggtcattatggatgctgaaacatttccgttttttggagaccgaaaattattactt
tgtaaaaacccgagcttctttaaagctaaacccgataaagttcaggttgaacacgattta
aatgttctccaatcctatctcgagcaacccgtggattattctgtgattgtgttcattgct
ccatacgagaaggtagatgagcgtaagaaaattataaaacaaatcaaagaagttggacag
gttattccgtgccaatcttttaaagaatatgaaatgaacgattggattcaatccatggct
aaggaactacatataaacttagagtcccctgcattagaaatctttattcaggaaaacggg
accaatttaatgtctattcgtaatgaacttgagaagatggctttatatgtaggagaaggg
gggacggtaacaaaggaagtggcagaactgcttgcttcacacaaccctcaagcatcagcc
tttaaattagttgatgctgtcatgaatcaaaatattcaacgggctatgttgatctataaa
gatttggaaaaacaaaatgaagagccaataggcttacttgcattgcttgcgtctcagttc
aggttgatcttccaatccaaactattgaagcaaaaaggttattctcaaaaccaaattgct
caacaagcaaaagtagctccatttgctgtaaaaatggctttgaaacgtgaaagaggcttt
actgataaagaactctccttgattatgcaacatttgaccgaagcagatgcagcgatcaaa
caaggaaagatggataaaacattagcctttgaaatgcttctgtacgaactaataaattta
aaacgatccactagtgcttaa
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