Polynucleobacter paneuropaeus: DPM16_00500
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Entry
DPM16_00500 CDS
T05507
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
poh
Polynucleobacter paneuropaeus
Pathway
poh00550
Peptidoglycan biosynthesis
poh01100
Metabolic pathways
poh01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
poh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DPM16_00500
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DPM16_00500
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
poh01003
]
DPM16_00500
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
poh01011
]
DPM16_00500
Enzymes [BR:
poh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
DPM16_00500
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DPM16_00500
Glycosyltransferases [BR:
poh01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
DPM16_00500
Peptidoglycan biosynthesis and degradation proteins [BR:
poh01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
DPM16_00500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AWW43836
UniProt:
A0A9Q2WMQ6
LinkDB
All DBs
Position
80778..83114
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AA seq
778 aa
AA seq
DB search
MALPPKDRPPQNQRSNPQPNRRPRDFRADPPAFAKSGSPLIKALFVMGMAVGVMFVLLLG
YAFLVAKPNLPKISALVDYNPKTPLRVYTADKVLIGEFGEERRKVIPLADMPLVMRNAVI
ATEDDRFYSHGGVDYVGVLRAGLANMRGHLAQGASTITMQVARNFFLSNEKTFSRKIYEV
LLAWEIESQLSKDKILEIYMNQIFLGQRAFGFSSAAQIYFGKELKDISTAEAAMLAGLPK
APSAYNPVTNFRRAKMRQTYILGRMRDLGYITPEEYQKAIAEELHIRGLGNEFSTRADFP
AEMVRQLLYAQYGDVIYSQGIDVYTTILKADQDAAYKAVRRGIFEYDLRHAYRGPEGFIN
LPDDQAKRQKVIDDALLAYPQLDDLQSGIVLDAKPKELQVIISTGDVITLKGDALKLASA
SLTDSAQPKKKLRPGSVVRLLQTDDGVWKLAQLPQVEAAFVSMNAQNGAILSLVGGFDFR
RNQFNHVTQAWRQPGSSFKPFIYAAALEKGFSPSTMVNDAPLSIGSLETGSQAWEPKNYD
GKYDGMMRLRNALAKSKNLVSVRIVRAIGPSYAQEYVKRFGFDPEKHPPYLTIALGAGSV
TPLQMATAYSVFANGGYQVEPYLIDRMIDTKGNVLFEAKPVRAGEDASRVLDKRTAFVMD
SLLQEVTKTGTAASARAKLGRTDIAGKTGTTNESHDAWFAGYNPKLVAIAWIGFDKPESL
GDKETGGGLALPMWISYMGVALKGVPQEAREVPDGVTQFDGDWFIPEFAPNGGVRELQ
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggctctccccccaaaagaccggccaccgcagaatcagcggtccaatccacagcccaat
cggcgtccgcgggattttcgtgcagacccacccgcatttgctaaatctggcagcccctta
attaaggctttatttgtgatggggatggccgttggggtgatgtttgttctattgctgggc
tatgcttttttggttgccaagccaaacttaccgaagatttcggcattggtggactacaac
cccaaaactcctttacgcgtctataccgccgataaagtattaattggggagtttggggaa
gagcgtcgcaaagtgattcccttagctgacatgcccttggtaatgagaaatgcggttatc
gctaccgaagatgaccgcttctactcacatggtggggtggactacgtcggtgttttgcgg
gcaggactagcaaatatgcgaggacaccttgcgcagggagcttccacaattacgatgcaa
gtggctcgaaatttctttctgagtaatgaaaaaaccttcagcagaaaaatatacgaagtt
ttgcttgcctgggaaatcgagtcgcagttaagcaaagataagattctggagatttatatg
aaccagatctttttgggccaaagagcgtttggtttttcaagtgctgcccaaatctatttc
ggcaaagagttaaaggatatcagcactgcagaggcggccatgttggcaggcttacctaaa
gcgccatcagcgtacaacccagttactaattttcgtcgagccaaaatgcgacaaacctat
atcttgggtcgcatgcgagatttgggttacatcactccagaggaatatcaaaaggcgata
gctgaagagttgcatattcgtgggcttggtaatgaatttagtacgcgcgcagactttcca
gctgagatggtccgtcaattactctatgcccaatatggcgatgtgatttattcacaaggc
atcgatgtttatacaaccatccttaaggctgatcaggatgccgcctacaaagcagtacgc
cgtggaatttttgaatatgatctgcgacatgcctatcgtgggccagaaggattcattaat
ttgcctgatgatcaggcaaaacgccagaaggtcatagacgatgccttactggcatatccc
cagttagacgatttgcaatcgggaatcgttctagatgctaagcccaaagagttgcaagtg
attatttcaactggtgatgtcattactttaaagggtgatgcattgaaattagcgagtgcc
tcattgactgatagcgcccagcccaagaaaaaacttcgccctggatccgtggtgcgttta
ttacaaactgacgatggcgtatggaaattagcgcagttgcctcaagtcgaggcggcattt
gtttcaatgaatgctcagaacggcgcaatcttatctttggttggtggatttgatttcaga
cgcaatcaatttaatcatgtaacacaggcttggcgtcagcctggttcttcatttaaacca
ttcatttacgccgccgctctggaaaaaggtttctctccaagcaccatggttaatgatgcg
cccctatcgattggtagtctggagactggtagtcaggcgtgggagcctaaaaactatgat
ggtaaatatgacggcatgatgcgtttacgcaatgcgctagccaagtctaaaaatttagta
tcagtcagaattgtgcgcgccattggaccttcgtatgcccaagaatatgtaaagcgtttt
ggcttcgatccagaaaagcatccaccgtatttaacgattgcgttgggcgcgggttcagta
acccctttgcaaatggcaaccgcgtatagcgtatttgcaaatggcggctatcaagtggag
ccctacttaattgataggatgattgatactaaaggtaatgtcttatttgaagcaaaaccg
gttcgtgctggtgaagatgcaagtcgagtgcttgataagcgtacagcctttgtgatggat
agtttgttacaagaagtaactaaaactggaacagctgctagtgcacgcgctaagttgggc
cgtactgatattgcaggaaaaactggtactaccaatgaatcacatgatgcttggtttgcg
ggatacaacccaaagctagttgcgatcgcttggattggttttgataagcccgaaagtttg
ggtgataaagaaaccggtggaggactcgcattaccaatgtggatctcgtatatgggagtt
gctttaaaaggggtccctcaagaagctcgcgaagtaccagatggtgttactcagtttgat
ggagattggttcattcctgagtttgcgcccaatggtggtgtacgcgaactgcaataa
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