Pseudomonas otitidis: PtoMrB4_05470
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Entry
PtoMrB4_05470 CDS
T06890
Name
(GenBank) hypothetical protein
KO
K11895
type VI secretion system protein ImpH
Organism
poj
Pseudomonas otitidis
Pathway
poj02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PtoMrB4_05470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
poj02044
]
PtoMrB4_05470
Secretion system [BR:
poj02044
]
Type VI secretion system
Imp/Vas secretion system core components
PtoMrB4_05470
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
CcmB
Motif
Other DBs
NCBI-ProteinID:
BCA26570
UniProt:
A0A679GGD1
LinkDB
All DBs
Position
complement(579438..580454)
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AA seq
338 aa
AA seq
DB search
MDTTHGPAALALSRLSQGIREYALFQAVLLAMERLHQADGTDEGIDEEHLYERIEFQANP
SLGFPGTDIHSLTFFEEGGETRARICLNLVRLSGSGSPLPAFYAEQVLGEGDDDNPTRDF
LDLFHHRLQRLLLPIWRKYRYRSSFQSGARDAFSERLFALIGLGSEELRSAEELNWKRLL
PYLGLLSLRAHSAALIEAVLRYYFKHAELFIEQCIERSVDILQEQLNRLGQANSQLGEDL
VLGERVRDRGGKFRIHIRQLDWERFHEFLPIGTGYQPLCALVRFTLRDPLDYDLRLVLRH
DAIRELRVGADNPCRLGWTSWLGRERADGIVSLRSRTH
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggacaccacgcatgggccagcagcccttgctctgagccgcctgagccagggcatccgg
gaatacgcgctgttccaggccgtactcctggcgatggagcgcctgcaccaggcggacggc
acggacgagggcatcgacgaggagcacctctacgagcgcatcgaattccaggccaacccg
agcctgggcttccccggcaccgatatccacagcctgaccttcttcgaagaagggggcgag
acgcgcgcgcgcatctgcctgaacctcgtccgtctctccggctcgggctcgccgctgcct
gccttttatgccgagcaggtgctgggcgaaggggacgacgacaaccccacccgggatttc
ctcgacctgttccaccaccggctgcagcggctgctgctgccgatctggcgcaagtaccgc
taccggtcgagcttccagagcggcgcccgggacgccttctccgaacggctgttcgccctg
atcgggctgggcagcgaggaactgcgcagcgccgaggagctgaactggaagcgcctgctg
ccctacctcgggctgctcagcctgcgcgcccactcggcggcactgatcgaggccgtgctg
cgctactacttcaagcatgccgagctgttcatcgagcaatgcatcgagcgcagcgtcgac
atcctccaggagcagctcaaccgcctgggccaggccaacagccaactgggcgaggacctg
gtactgggggagcgggtgcgcgatcgcggcggcaagttccgcatccacatccgccagctg
gactgggaacgcttccacgaattcctgcctatcggcaccggctaccagcccctctgcgcg
ctggtgcgcttcaccctgcgcgacccgctggactacgacctccgcctggtactgcgccac
gacgccatccgcgaactgcgggtcggcgccgacaacccctgccgcctcggctggaccagc
tggctgggccgcgaacgtgccgacggcatcgtctcgctgcgcagccgcactcattaa
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