Polaribacter sp. BM10: BXQ17_12035
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Entry
BXQ17_12035 CDS
T04746
Name
(GenBank) RNA pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
pola
Polaribacter sp. BM10
Brite
KEGG Orthology (KO) [BR:
pola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pola03009
]
BXQ17_12035
03016 Transfer RNA biogenesis [BR:
pola03016
]
BXQ17_12035
Enzymes [BR:
pola01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
BXQ17_12035
5.4.99.29 23S rRNA pseudouridine746 synthase
BXQ17_12035
Ribosome biogenesis [BR:
pola03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BXQ17_12035
Transfer RNA biogenesis [BR:
pola03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
BXQ17_12035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AQS94762
UniProt:
A0A1U9L9S0
LinkDB
All DBs
Position
complement(2740318..2741991)
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AA seq
557 aa
AA seq
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MLKHLQSFKTDISSIQLPEKFTFPFYYEPHPLAKIASNELQEYLINQQDFKHNFGLNNDT
TTLPIGKMFGVLIVKDKDDNIGYLAAFSGKLADKSLPEKFVPPVFNMRTEGSFYIKGELE
IEAINAKLSAITNSIEFITAKKNVKKLSKETEDDLAFQRKKMKSLKSERKAIKKNAEKSL
SKLELDKLNKKLMQESYNNQFFMKELQEYYQDKLSKVSSNYLLLKDEISALKKSRKEKSN
YLQQTLFSKYAFLNKDKELKNLLDIFNDPAIKPPAGSGECSAPKLLQYAFKNDLTPITMA
EFWWGISPNSAIRKHKNYYPACQSRCKPILSHMLKGIKMDDNLLLENLAENKELEIIYED
DVLLAVNKPAEFLSVPGKDIKDSVYTRIKDKYPEATGPIIVHRLDMSTSGILLLTKTKEA
NKVLQSQFINRTIKKRYVALLDGILQNNIGKIKLPLRVDLDDRPKQLVDFKFGKPAETDW
EIISEINNKTKVYFYPITGRTHQLRVHAAHKNGLNTPIVGDDLYGNKQNRLHLHAEFIEF
NHPVTLKRMSLKVDADF
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcacttgcaatcttttaagacagatatttctagcatacaactgccagaaaaa
tttacatttccgttttattacgaaccacatcctttagctaaaattgcgagtaatgagctg
caagaatatttaataaatcagcaagattttaaacacaattttggtttaaataacgataca
acaactttgcccataggtaaaatgtttggtgttttaatagtaaaagacaaagatgataat
attggttatttagcagctttttctggtaaactagcagataaaagtttgccagaaaaattt
gtgcctcctgtttttaacatgcgtacagaaggaagtttttacataaaaggcgaattagaa
atagaggctataaatgcaaaacttagtgcaataacaaatagcatcgaatttataactgct
aaaaaaaatgtgaaaaaattatctaaagaaactgaagatgacttggcttttcaaagaaaa
aaaatgaagtctttaaagtctgaaagaaaagcaattaaaaagaatgctgaaaagtcttta
agtaaattagagcttgataagcttaacaaaaaactgatgcaagaaagttacaacaatcag
ttttttatgaaagaattacaagagtattatcaagataaattatcaaaagttagtagtaat
tatttgttacttaaagatgaaatatcagcattaaaaaaatctagaaaagaaaaatcgaat
tatttacagcaaaccttatttagcaaatatgcttttttaaataaagacaaagagcttaaa
aacttattagatatatttaatgatccagcaattaaaccacctgctggttctggagaatgc
tctgcgccaaaacttttgcaatatgcttttaagaatgatttaaccccaattacaatggca
gaattttggtggggaatttcgccaaactcagcaattagaaaacataaaaactattatccg
gcttgccaaagtagatgtaaacccattttatctcatatgctgaaaggtattaaaatggat
gacaatttattattggaaaatttagctgaaaataaagaattagaaataatttatgaggat
gatgtactacttgcggtaaacaaacctgcagagtttttgtctgtacctggtaaagacatt
aaagattctgtttacactagaattaaagataaatatccggaagcaactggaccaataatc
gtgcatcgattagacatgtctacatctggtatcttattactaaccaaaacgaaagaagct
aataaagttttgcaaagtcagtttatcaatagaactattaaaaaacgttatgttgctttg
ctagacggcattttacaaaataatataggaaaaataaaattaccgcttcgagtagattta
gacgacagaccaaaacaacttgtagattttaagtttgggaaacctgcggaaaccgattgg
gaaataatttctgaaattaataacaaaacgaaagtttacttttacccaataactggtaga
acgcaccagttaagagttcatgcggctcataaaaacggattaaacactcctattgtgggt
gatgatctttatggtaacaaacaaaacagattgcatttacatgcagaatttatagagttt
aatcatcctgtaactcttaaaagaatgagcttaaaagttgatgccgatttttaa
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