Pongo abelii (Sumatran orangutan): 100172296
Help
Entry
100172296 CDS
T01416
Symbol
AARS
Name
(RefSeq) alanine--tRNA ligase, cytoplasmic
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100172296 (AARS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pon01007
]
100172296 (AARS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pon03016
]
100172296 (AARS)
Enzymes [BR:
pon01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
100172296 (AARS)
Amino acid related enzymes [BR:
pon01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
100172296 (AARS)
Transfer RNA biogenesis [BR:
pon03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100172296 (AARS)
Prokaryotic type
100172296 (AARS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Med11
Syntaxin-6_N
Motif
Other DBs
NCBI-GeneID:
100172296
NCBI-ProteinID:
NP_001125391
UniProt:
Q5RC02
LinkDB
All DBs
Position
16:52117941..52153231
Genome browser
AA seq
968 aa
AA seq
DB search
MDSTLTASKIRQRFIDFFKRNEHTYIHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPS
HPMAKPSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALE
LLTQEFGIPIERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGD
TGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDT
GMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLAD
HARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDA
FPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGF
PVDLTGLIAEEKGLVVDMDGFEEERKLAQLKSQGKGAGGEDLIMLDIYAIEELRARDLEV
TDDSPKYNYHLDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGG
QIYDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIYGDLKVGDQVWLFIDEPRRRP
IMSNHTATHILNFALRSVLGEADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEMI
EAAKPVYTQDCSLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSV
EFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAGSLKKPLSVMEAK
VKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQKR
VLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKMHSPQTAAMLFTVDNEAGKIT
CLCQVPQNAANRGLKASEWVQQVSGLMDGKGGGKDVSAQATGKNVGCLQEALQLATSFAQ
LRLGDVKN
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggactcgactctaacagcaagtaaaatccggcagcgatttatagatttcttcaagagg
aacgagcatacctatattcactcgtctgccaccatcccattggatgaccccactttgctc
tttgccaatgcaggcatgaaccagtttaaacccatcttcctcaacacaattgacccatct
caccccatggcaaagccgagcagagctgccaatacccagaaatgcatccgggctgggggc
aaacataatgacctggacgatgtaggcaaggatgtctatcatcacaccttcttcgagatg
ttgggttcttggtcttttggagattactttaaggaattggcatgtaagatggctctggaa
ctcctcacccaagagtttggcattcccattgaaagactttatgttacttactttggcggg
gatgaagcagctggcttagaaccagatctggaatgcaaacagatctggcaaaatttgggg
ctggatgacaccaaaatcctcccaggcaacatgaaggataacttctgggagatgggtgac
acgggcccctgtggtccttgcagtgagatccactacgaccggattggtggtcgggacgcc
gcacaccttgtcaaccaggatgatcctaatgtgctggagatctggaaccttgtgttcatc
cagtataacagggaagctgatggcattctgaaacctcttcctaagaaaagcattgacaca
gggatgggcctggagcgactggtatctgtgctgcagaataagatgtccaactatgacact
gacctttttgtcccttactttgaagccattcagaagggcactggtgcccgaccgtacact
gggaaagttggtgctgaggatgccgatgggattgacatggcctaccgggtgctagctgac
cacgctcggaccatcactgtggcactggctgacggtggccggcctgacaacacaggccgc
ggatatgtgttgagacggattctccgccgagctgtccgatatgcccatgaaaagctcaat
gccagcaggggcttctttgctacgttagtggatgttgtcgtccagtccctgggagatgcg
tttcctgagctgaagaaggacccagacatggtgaaggacatcattaatgaagaagaggtg
cagtttctcaagactctcagcagagggcgtcgcatcctggacaggaaaattcagagcctg
ggagacagcaagaccattcccggagacactgcttggctcctctatgacacctatgggttt
ccagtggatctgactggactgattgctgaagagaagggcctggtggtagacatggatggc
tttgaagaggagaggaaactggcccagctgaaatcacagggcaagggagccggtggggaa
gacctcattatgctggacatttacgctattgaagagctccgggcacgggatctggaggtc
acagatgattccccaaagtacaattaccatttggactccagtggtagctacgtatttgag
aacacagtggctacggtgatggctctgcgcagggagaagatgttcgtggaagaggtatcc
acaggccaggagtgtggagtggtgctggacaagacctgtttctatgccgagcaaggaggg
cagatctatgacgaaggctacctagtgaaggtggatgacagcagtgaggataaaacagag
tttacagtgaagaatgctcaggtccgaggagggtatgtgctacacatcggaacgatctac
ggtgacctgaaagtcggggatcaggtctggctgtttattgatgagccccgacgacgaccc
atcatgagcaaccacacagctacacacatactgaacttcgccctgcgctcagtgcttggg
gaagctgaccagaaaggctcattggttgctcctgaccgcctcagatttgactttactgcc
aagggagccatgtccacccaacagatcaagaaggctgaagagattgctaatgagatgatt
gaggcagccaagcccgtctatactcaggattgctccctggcggcagcgaaagccatccag
ggcctacgggctgtgtttgatgagacctatcctgaccctgtgcgagtcgtctccattggg
gtcccggtgtccgagttgctggatgacccctctggacctgctggctccctgacttctgtt
gagttctgtgggggaacgcacctgcggaactcgagtcacgcaggagcttttgtgatcgtg
acggaagaagccattgccaagggtatccggaggattgtggctgtcacaggtgccgaagcc
cagaaggccctcaggaaagcagggagcttgaagaaacctctctctgtcatggaagccaaa
gtgaaggcccagactgctccaaacaaggatgtgcagagggagattgctgaccttggagag
gccctggccactgcagtcatcccccagtggcagaaagacgaattgcgggagactctgaaa
tccctaaagaaggtcatggatgacctggaccgagccagcaaagccgatgtccagaaacga
gtgttagagaagacgaagcagctcatcgacagcaaccccaaccagccccttgtcatcctg
gagatggagagtggcgcctcagccaaggccctgaatgaagccttgaagctcttcaagatg
cactcccctcagacggctgccatgctcttcacggtggacaatgaggctggcaagatcacg
tgcctgtgtcaagtcccccagaatgcagccaatcggggcttaaaagccagcgagtgggtg
cagcaggtgtcaggcctgatggacggtaaaggtggtggcaaagatgtgtctgcacaggcc
acaggcaagaacgttggctgcctgcaggaggcgctgcagctggccacttccttcgcccag
ctgcgcctcggggatgtaaagaactga
DBGET
integrated database retrieval system
