Pongo abelii (Sumatran orangutan): 100431346 Help Entry 100431346         CDS       T01416                                  Symbol SMARCC1 Name (RefSeq) SWI/SNF complex subunit SMARCC1   KO K11649   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C Organism pon  Pongo abelii (Sumatran orangutan) Pathway pon03082   ATP-dependent chromatin remodeling pon04714   Thermogenesis pon05225   Hepatocellular carcinoma Brite KEGG Orthology (KO) [BR:pon00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     100431346 (SMARCC1)  09150 Organismal Systems   09159 Environmental adaptation    04714 Thermogenesis     100431346 (SMARCC1)  09160 Human Diseases   09162 Cancer: specific types    05225 Hepatocellular carcinoma     100431346 (SMARCC1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pon03021]     100431346 (SMARCC1)    03036 Chromosome and associated proteins [BR:pon03036]     100431346 (SMARCC1) Transcription machinery [BR:pon03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      100431346 (SMARCC1) Chromosome and associated proteins [BR:pon03036]  Eukaryotic type   Chromatin remodeling factors    BAF complex     100431346 (SMARCC1)    PBAF complex     100431346 (SMARCC1)    GBAF(ncBAF) complex     100431346 (SMARCC1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SWIRM-assoc_2 SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 Chromo BRCT_2 DUF919 SpeFL Motif Other DBs NCBI-GeneID:  100431346 NCBI-ProteinID:  XP_024100125 Ensembl:  ENSPPYG00000013915 LinkDB All DBs Position 3:94126484..94323188 Genome browser AA seq 1105 aa AA seqDB search MAAAAGGGGPGAAVGATGSGVAAAAAGLAVYRRKDGGPATKFWESPETVSQLDSVRVWLG KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKL ANKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQDDEEWLRPVMRKDKQVLVHWGFYPDSY DTWVHSNDVDAEIEDPPIPEKPWKVHVKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRI STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLKKDSENTPVKGGTVADLDEQDEETVTAGG KEDEDPAKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK MEADPDGQQPEKAENKMENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKE LTDTCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ QQHGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP GSMMPGQHMPGRMIPTVAANIHPSGSGPTPPGMPPMPGNILGPRVPLTAPNGMYPPPPQQ QPPPPPPADGVPPPPAPGPPASAAP NT seq 3318 nt NT seq  +upstreamnt  +downstreamnt atggccgcagcggcaggcggcggcgggccgggggcagcggtaggcgccacgggctcgggg gtcgcggcggcagccgcaggcctagctgtttatcggcggaaggatgggggcccggccacc aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc aagcactacaagaagtatgttcatgcggatgctcctaccaataaaacactggctgggctg gtggtgcagcttcttcagttccaggaagatgcctttgggaagcatgtcaccaacccggcc ttcaccaaactccctgcaaagtgtttcatggatttcaaagctggaggcaccttatgtcac attcttggggctgcttacaagtataaaaatgaacagggatggcggaggtttgacctacag aacccatctcgaatggatcgtaatgtggaaatgtttatgaacattgaaaaaacattggta cagaacaattgtttgaccagacccaacatctacctcattccagacattgatctgaagttg gctaacaaattgaaagatatcatcaaacgacatcagggaacatttacggatgagaagtca aaagcttcccaccacatttacccgtattcttcctcacaagacgatgaagaatggttgaga ccagtgatgagaaaagacaagcaagtgttagtgcattggggcttttacccagacagctat gatacttgggtccatagtaatgatgttgatgctgaaattgaagatccaccaattccagaa aagccatggaaggttcatgtgaaatggattttggacactgatattttcaatgaatggatg aatgaggaggattatgaggtggatgaaaataggaagcctgtgagttttcgtcagcggatt tcaaccaagaatgaagagccagtcagaagtccagaaagaagagatagaaaagcatcagct aatgctcgaaagaggaaacattcgccttcgcctccccctccgacaccaacagaatcacgg aagaagagtgggaagaaaggccaagctagcctttatgggaagcgcagaagtcagaaagag gaagatgagcaagaagatctaaccaaggatatggaagacccaacacctgtacccaatata gaagaagtagtacttcccaaaaatgtgaacctaaagaaagatagtgaaaatacacccgtt aaaggaggaactgtagcagatctagatgagcaggatgaagaaacagtcacagcaggagga aaggaagatgaagatcctgccaaaggtgatcagagtcgatcagttgaccctggggaagat aatgtgacagagcagaccaatcacattattattcctagttatgcatcatggtttgattat aactgtattcatgtgattgaacggcgtgctcttcctgagttcttcaatggaaaaaacaaa tccaagactccagaaatatacttggcatatcgaaattttatgatcgacacgtatcgccta aacccccaagagtatttaactagcactgcttgtcggaggaacttgactggagatgtgtgt gctgtgatgagggtccatgcctttttagagcagtggggactcgttaattaccaagttgac ccggaaagtagacccatggcaatgggacctcctcctactcctcattttaatgtattagct gataccccctctgggcttgtgcctctgcatcttcgatcacctcaggttcctgctgctcaa cagatgctaaattttcctgagaaaaacaaggaaaaaccaattgatttgcagaactttggt ctccgtactgacatttactccaagaaaacattagcaaagagtaaaggtgctagtgctgga agagaatggactgaacaggagacccttctactcctggaggccctggagatgtacaaggat gattggaacaaagtgtcggaacatgttggaagtcgtactcaggatgaatgcatcctccac tttttgagacttcccattgaggacccataccttgagaattcagatgcttcccttgggcct ttggcctaccagcctgtccccttcagtcagtcaggaaatccagtcatgagtactgttgct tttttggcatctgtggtagaccctcgcgtggcatctgctgcagcaaaagcggctttggag gagttttctcgggtccgggaggaggtaccactggaattggttgaggctcatgtcaagaaa gtacaagaagcagcacgagcctctgggaaagtggatcccacctacggtctggagagcagc tgcattgcaggcacagggcccgatgagccagagaagcttgaaggagctgaagaggaaaaa atggaagccgaccctgatggtcagcagcctgaaaaggcagaaaataaaatggaaaatgaa acggatgaaggtgataaagcacaagatggagaaaatgaaaaaaatagtgaaaaggaacag gatagtgaagtgagtgaggataccaaatcagaagaaaaggagactgaagagaacaaagaa ctcactgatacatgtaaagaaagagaaagtgatactgggaagaagaaagtagaacatgaa atttccgaaggaaatgttgccacagccgcagcagctgctcttgcctcagcggctaccaaa gccaagcacctggctgcagtggaagaaagaaagatcaagtccctggtagctctcttggtt gagacacaaatgaagaaactagagatcaaacttcgacattttgaagagctggaaactatc atggacagagagaaagaagctctagaacaacagaggcagcagttgcttactgaacgccag aacttccacatggaacagctgaagtatgctgaattacgagcacgacagcaaatggaacag cagcagcatggccagaaccctcaacaggcacaccagcactcaggaggacctggcctggcc ccacttggagcagcagggcaccctggcatgatgcctcatcaacagccccctccctaccct ctgatgcaccaccagatgccaccacctcatccaccccagccaggtcagataccaggccca ggttccatgatgcccgggcagcacatgccaggccgcatgattcccactgttgcagccaac atccacccctctgggagtggccctacccctcctggcatgccgccaatgccaggaaacatc ttaggaccccgggtacccctgacagcacctaatggcatgtatccccctccaccacagcag cagccgccgccaccaccacctgcagatggtgtccctccacctcctgctcctggcccgcca gcctcagctgctccttag

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