Pongo abelii (Sumatran orangutan): 100436622
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Entry
100436622 CDS
T01416
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100436622 (TNRC6B)
03036 Chromosome and associated proteins [BR:
pon03036
]
100436622 (TNRC6B)
Messenger RNA biogenesis [BR:
pon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100436622 (TNRC6B)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100436622 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
100436622
NCBI-ProteinID:
XP_024095493
Ensembl:
ENSPPYG00000011849
LinkDB
All DBs
Position
22:24268756..24553478
Genome browser
AA seq
1812 aa
AA seq
DB search
MQTNEGEVSEESSSKVEQEDFVMEGHGKTPPPGEESKQEKEQEREEQLMEDKKRKKEDKK
KKEATQKVTEQKTKVPEVTKPSLSQPTAASPIGSSPSPPVNGGNNAKRVAVPNGQPPSAA
RYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPCTAPGANPNNAQVTGALL
QSESGTAPDSTLGGAAASNYANSTWGSGASSNNGTSPNPIHIWDKVIVDGSDMEEWPCIA
SKDTESSSENTTDNNSASNPGSEKSTLPGSTTSNKGKGSQCQSASSGNECNLGVWKSDPK
AKSVQSSNSTTENNNGLGNWRNVSGQDRIGPGSGFSNFNPNSNPSAWPALVQEGTSRKGA
LETDNSNSSAQVSTVGQTSREQQSKMENAGVNFVVSGREQAQIHNTDGPKNGNTNSLNLS
SPNPMENKGMPFGMGLGNTSRSTDAPSQSTGDRKTGSVGSWGAARGPSGTDTVSGQSNSG
NNGNNGKEREDSWKGASVQKSTGSKNDSWDNNNRSTGGSWNFGPQDSNDNKWGEGNKMTS
GVSQGEWKQPTGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNAQAPCWGRSSSS
TGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTGWG
QTQIKQDTVWDIEEVPRPEGKSDKGTEGWESAATQTKNSGGWGDAPSQSNQMKSGWGELS
ASTEWKDPKNTGGWNDYKNNNSSNWGGGRPDEKTPSSWNENPSKDQGWGGGRQPNQGWSS
GKNGWGEEVDQTKNNNWESSTSKPVSGWGEGGQNEIGTWGNGGNASLASKGGWEDCKRSP
AWNETGRQPNSWNKQHQQQQPPQQPPPPQPEASGSWGGPPPPPPGNVRPSNSSWSSGPQP
ATPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPNSYNYKNVNLWDKNSQGGPAPREPN
LPTPMTGKSASVWSKSTPPAPDNGTSAWGEPNESSPGWGEMDDTGASTTGWGNTPANAPN
AMKPNSKSMQDGWGESDGPVTGTRHPSWEEEEDGGVWNTAGSQGSASSHNSASWGQGGKK
QMKCSLKGGNNDSWMNPLAKQFSNMGLLSQTEDNPSSKMDLSVGSLSDKKFDVDKRAMNL
GDFNDIMRKDRSGFRPPNSKDMGTTDSGPYFEKGGSHGLFGNSTAQSRGLHTPVQPLNSS
PSLRAQVPPQFISPQVSASMLKQFPNSGLSPGLFNVGPQLSPQQIAMLSQLPQIPQFQLA
CQLLLQQQQQQQLLQNQRKISQAVRQQQEQQLARMVSALQQQQQQQQRQPGMKHSPSHPV
GPKPHLDNMVPNALNVGLPDLQTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTS
MMEGLPSVATQEANMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAGDSWLPAKS
PPTNKIGSKSSNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQL
LRDNTTGSNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHL
SNKMWKNHISSRNTTPLPRPPPGLTNPKPSSPWSSTAPRSVRGWGTQDSRLASASTWSDG
GSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQT
ALHMCVLGNTTILAEFATDDEVSRFLAQAQPPTPAATPSAPAAGWQSLETGQNQSDPVGP
ALNLFGGSTGLGQWSSSAGGSSGADLAGASLWGPPNYSSSLWGVPTVEDPHRMGSPAPLL
PGDLLGGGSDSI
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaatgagggagaagtatcggaagaaagcagttccaaggtggaacaggaggat
tttgtaatggaagggcatggcaagactccacctcctggtgaagagagcaaacaagagaag
gagcaagaaagggaagaacagttaatggaagacaagaaaaggaagaaagaggataaaaag
aaaaaagaagccactcagaaggtcacggaacaaaaaaccaaagtgcccgaagtgacgaaa
ccaagtttaagccaaccaacggccgccagcccaattggcagctctccatcgccaccagtc
aatggtggcaacaatgccaaaagggtggcagtgccgaacggacaaccgccaagcgccgcc
cgctacatgcctcgggaggtgccgccgcgattccgttgccagcaggaccacaaagtgtta
ctaaagcgtgggcagccccctccaccgtcctgcatgctccttgggggcggggcagggcct
cctccctgcacagcacctggagcaaacccaaacaacgcacaagtgacaggagcgctgctg
cagagtgagagtgggactgcgccagactcaacccttggaggtgctgctgcttcaaattat
gcaaattccacttggggctcgggagcttcctccaacaacggcacctcccccaacccaatt
cacatctgggacaaggtgattgtagacgggtctgacatggaagagtggccttgtattgcc
agcaaagacactgaatcttcttccgaaaacaccaccgataacaacagtgcctcgaaccct
ggctctgagaagagcactctgccaggaagcaccactagtaacaaaggaaaagggagccag
tgccagtctgcaagttctgggaacgaatgtaatcttggggtctggaaatctgaccctaag
gctaaatctgttcaatcttccaactctactacagagaacaacaatggactaggaaattgg
aggaatgtcagtggtcaggatagaattggacctggctctggcttcagcaactttaaccca
aatagcaacccatctgcctggccagcactggtccaagaaggaacttctaggaaaggggca
ttggaaacagataatagtaattccagtgcacaggttagcacagtaggtcagacatccagg
gaacagcagtcaaagatggaaaatgcgggtgttaattttgttgtctctggcagagaacag
gctcaaattcataacactgatggaccaaaaaatggaaacactaactccttgaacttaagt
tcaccaaaccccatggagaataagggaatgccctttggaatgggcttggggaacacctcc
aggagcactgatgccccttcacaaagcactggagatcgaaagactgggagtgttggatct
tggggtgcagctagggggccttctggaactgacacagtctctggacaaagcaattctgga
aacaatgggaacaatggaaaagagagagaggactcctggaaaggagcttctgttcagaaa
tcaactgggtcaaaaaatgactcttgggacaacaataacaggtctacgggtgggtcctgg
aacttcggcccccaggactctaatgacaacaaatggggtgaagggaacaaaatgacatct
ggggtctctcagggagaatggaaacagccgactgggtctgatgagttgaaaattggagaa
tggagtggtccaaaccaaccaaattctagcactggagcatgggacaatcaaaagggccac
cccctccctgaaaaccaaggcaacgcccaggctccctgttggggaagatcttccagctcc
acaggaagtgaagttggaggtcaaagcactggaagcaaccacaaagcaggaagtagtgac
agtcataactctggccgtcggtcgtacaggcccacacatcctgattgtcaggctgtcttg
cagactcttttgagccgaactgatttggaccccagggtgctctcaaacactggctggggc
caaactcaaattaagcaggacacagtgtgggacattgaagaggtgccaaggcctgagggg
aaatctgacaaaggaactgaggggtgggagagcgctgccacacagaccaagaactcaggg
ggctggggagatgcacccagccaaagcaatcaaatgaagtctggatggggggagctctca
gcctctacagagtggaaagaccccaagaacacaggaggctggaatgactacaagaacaac
aactcttccaactggggaggaggacgacctgatgaaaagacaccttcctcttggaatgag
aatcccagcaaggatcaggggtggggaggtggacgccagcccaatcaaggatggtcttct
ggaaagaatggttggggagaggaagtcgatcagacaaaaaacaacaattgggaaagttct
acaagtaaacctgtgtctgggtggggtgaaggagggcagaatgaaatcgggacttggggt
aatggtggcaatgcaagcctagcttcaaaaggtgggtgggaggattgcaaaagatcccca
gcatggaatgagacgggccgacagcccaattcctggaataaacaacaccaacagcagcag
cccccacagcagccaccgccaccacaaccagaggcttctggttcgtggggaggcccaccc
ccaccacctccaggcaacgttcgaccttccaattccagctggagcagcgggccacagcct
gcaacacctaaggatgaggaacccagtggttgggaagagccatccccacagtcaattagt
cggaaaatggacattgatgatggcacttcagcatggggagaccctaacagttataactac
aagaatgtgaatctgtgggataagaattcccaagggggcccagcacctcgagaaccaaac
ctgcccaccccaatgaccggtaaatctgcatcagtctggagcaaaagcacaccacctgct
ccagataatggtacttccgcttggggtgagccaaatgaaagcagtcctgggtggggcgag
atggatgatacaggagcatcgaccacaggctgggggaacacgcccgccaacgctcccaat
gccatgaagcctaattccaaatctatgcaagatggctggggggagagtgacgggccagtc
acaggaactcgccatcccagctgggaagaggaggaggatggaggagtctggaacaccgct
ggctctcagggcagtgcttcctcccacaactcagcaagctggggacaaggaggaaagaaa
caaatgaagtgctcactcaaaggaggaaacaatgattcatggatgaatcctcttgccaaa
caattttcaaatatgggattgctgagtcagactgaagataatccaagcagcaaaatggat
ttgtctgtaggaagcctttcagataaaaaatttgatgtggacaagcgagcgatgaatctc
ggggattttaatgatatcatgaggaaggatcgatctgggttccgtccacctaattccaaa
gacatgggaaccacagatagtgggccttattttgagaagggcggtagtcatggtttgttt
ggaaacagcacagcacaatcgagaggtctgcacacaccagtgcagccactaaattcttct
cccagtctccgggcgcaagtgcctccccagtttatttccccccaggtttctgcctcaatg
ctcaagcagtttcccaacagtggcctgagtccaggtcttttcaatgtggggccccagtta
tctcctcaacaaattgccatgctgagccagcttccacaaattccccagtttcagttggca
tgtcagcttctcttgcagcagcagcaacagcagcagttgttacagaaccagagaaagatt
tctcaagctgtacgccaacagcaagagcagcagctggctcgaatggtgagtgcactgcag
cagcagcagcagcagcagcagaggcagccaggcatgaagcactcaccctctcatcctgtt
gggcccaagccgcatctggacaacatggtacccaacgcgttgaatgtggggctcccagac
cttcaaaccaaagggccaatacctggatatggttctggcttcagctctggaggcatggac
tatggcatggttggtgggaaggaggctggaaccgagtctcgctttaaacagtggacctcc
atgatggaggggctgccctctgtagccacacaggaagccaatatgcacaaaaatggcgct
atagtggcccctggtaagacccggggagggtcaccgtacaaccagtttgatatcatccct
ggtgacacactgggtggccatacgggtcctgctggtgatagctggttacctgccaaatct
ccaccaacaaacaaaatcggaagtaaatccagcaatgccagttggcctccagaattccaa
ccaggagtgccatggaaaggtatccaaaacattgaccctgaatctgacccctatgtcacc
ccaggaagtgtgctggggggtacagccacatctcccattgtagatactgaccaccaactg
ctgcgggataacaccacagggtctaattcttccctcaacacctcgctgccttcacctggt
gcctggccctacagtgcctctgacaactcctttaccaacgttcatagcacttcagcaaag
ttccctgattacaaatcaacatggtccccagatcccataggacacaaccccactcatctc
tccaacaagatgtggaaaaaccatatttcctccaggaacactacaccgctgccccgccca
cctcctggtctgaccaaccccaaaccatcatctccctggagcagcacagcaccccgatca
gtcagggggtgggggacacaggactcacggctcgcctcggcctctacctggagtgatggt
ggctcagttcgtcctagttactggctggttcttcacaatctcactccacagattgatggg
tcaaccttgagaacgatctgcatgcagcatggcccactgctgacattccatctgaatcta
acccagggcactgccctgatccgatacagcaccaaacaggaggcggccaaggcccaaact
gcactgcacatgtgtgtgttgggaaacactaccatccttgctgagtttgccactgatgat
gaagtcagccgctttctggcacaagctcagccccctacacctgcagcaaccccgagtgca
ccagctgcggggtggcagtcgctggagaccggccagaaccagtcagatcccgtgggacct
gctctgaatctttttggtgggtccactgggctcgggcagtggagcagcagcgctggtggc
agcagcggggccgatcttgctggcgcttcgttgtgggggcccccaaactattcttctagc
ttatggggagtcccaacggtggaagatccccataggatgggcagccctgctcctttacta
cctggtgaccttctgggaggagggtcggattcaatctga
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integrated database retrieval system
