Pongo abelii (Sumatran orangutan): 100439302
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Entry
100439302 CDS
T01416
Symbol
NR1D1
Name
(RefSeq) nuclear receptor subfamily 1 group D member 1
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
100439302 (NR1D1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pon03000
]
100439302 (NR1D1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pon03310
]
100439302 (NR1D1)
Transcription factors [BR:
pon03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100439302 (NR1D1)
Nuclear receptors [BR:
pon03310
]
1. Thyroid hormone like
1D. Rev-Erb
100439302 (NR1D1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100439302
NCBI-ProteinID:
XP_009250103
Ensembl:
ENSPPYG00000008469
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Position
17:complement(47563445..47571384)
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AA seq
614 aa
AA seq
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MTTLDSNNNTGGVITYIGSSGSSPSRTSPESLYSDNSNGSFQSLTQGCPTYFPPSPTGSL
TQDPARSFGSIPPSLSDDGSPSSSSSSSSSSSSFYNGSPPGSLQVAMEDSSRVSPSKSTS
NITKLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRI
NRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLETS
PTQHPTPGPMGPSPPPAPVPSPLVGFSQFPQQLTPPRSPSPEPTVEDVISQVARAHREIF
TYAHDKLGSSPGNFNANHASGSPPATTPHRWENQGCPPAPNDNNILAAQRHNEALNGLRQ
APSSYPPTWSPGPAHHSCHQSNSNGHRLCPTHVYAAPEGKAPANDPRQGSSKNVLLACPM
NMYPHGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVL
MVRFASLFNVKDQTVMFLSRTTYSLQELGAMGMGDLLNAMFDFSEKLNSLALTEEELGLF
TAVVLVSADRSGMENSASVEQLQETLLRALRALVLKNRPLETSRFTKLLLKLPDLRTLNN
MHSEKLLSFRVDAQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccctggactccaacaacaacacaggtggtgtcatcacctacattggctccagt
ggctcctccccaagccgcaccagccctgaatccctctatagtgacaactccaatggcagc
ttccagtccctgacccaaggctgtcccacctacttcccaccatcccccactggctccctc
acccaagacccggctcgctccttcgggagcattccacccagcctgagtgatgacggctcc
ccttcttcctcatcttcctcatcatcctcctcctcctccttctataatgggagccccccc
gggagtctacaagtggccatggaggacagcagccgagtgtctcccagcaagagcaccagc
aacatcaccaagctgaatggcatggtgttactgtgtaaagtgtgtggggatgttgcctcg
ggcttccactacggtgtgcacgcctgtgagggctgcaagggctttttccgtcggagcatc
cagcagaacatccagtacaaaaggtgtctgaagaatgagaattgctccatcgtccgcatc
aatcgcaaccgctgccagcaatgtcgcttcaagaagtgtctctccgtgggcatgtctcga
gacgctgtgcgttttgggcgcatccccaaacgagagaagcagcggatgcttgctgagatg
cagagtgccatgaacctggccaacaaccagttgagcagccagtgcccgctggagacttca
cccacccagcaccccaccccaggccccatgggcccctcgccaccccctgctccagtcccc
tcacccctggtgggcttctcccagttcccacaacagctgacgcctcccagatccccaagc
cctgagcccacagtggaggatgtgatatcccaggtggcccgggcccatcgagagatcttc
acctacgcccatgacaagctgggcagctcacctggcaacttcaatgccaatcatgcatca
ggtagccctccagccaccaccccacatcgctgggaaaatcagggctgcccacctgccccc
aatgacaacaacatcttggctgcccagcgtcacaacgaggccctaaatggtctgcgccag
gccccctcctcctaccctcccacctggtctcctggccccgcacaccacagctgccaccag
tccaacagcaatgggcaccgtctatgccccacccacgtgtatgcagccccagaaggcaaa
gcacctgccaacgatccccggcagggcagctcaaagaatgttctgctggcatgtcccatg
aacatgtacccgcacggacgtagtgggcgaacggtgcaggagatctgggaggatttctcc
atgagcttcacgcccgctgtgcgggaggtggtagagtttgccaaacacatcccgggcttc
cgtgacctttctcagcacgaccaagtcaccctgcttaaggctggcacctttgaggtgctg
atggtgcgctttgcttcgttgttcaacgtgaaggaccagacagtgatgttcctaagccgc
accacctacagcctgcaggagcttggtgccatgggcatgggagacctgctcaatgccatg
ttcgacttcagcgagaagctcaactccctggcgcttaccgaggaggagctgggcctcttc
accgcggtggtgcttgtttctgcagaccgctcgggcatggagaattccgcttcggtggag
cagctccaggagacgctgctgcgggctcttcgggctctggtgctgaagaaccggcccttg
gagacttcccgcttcaccaagctgctgctcaagctgccggacctgcggaccctgaacaac
atgcattccgagaagctgctgtccttccgggtggacgcccagtga
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