Pongo abelii (Sumatran orangutan): 100442817
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Entry
100442817 CDS
T01416
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pon04040
]
100442817
Ion channels [BR:
pon04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100442817
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ank_2
Ion_trans
Ank
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100442817
NCBI-ProteinID:
XP_024110795
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Position
11:complement(63842007..63887916)
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AA seq
1138 aa
AA seq
DB search
MAPVKISHVVSFSSQDPKYPVENLLNPDSPRRPWLSCPQDKSGQLKVELQLERAVPIGYI
DVGNCGCAFLQIDVGRSSWPLDRPFITLLPATMLMSLTDSKQGKNRSGVRMFKDVDFLAP
ASGELWDRLRLTCSQPFTRHQSFGLAFLRVRSSLDSLDDSVVGPSALVSSVLNKGSSDAE
ESGPSPWLANPSIRRTFFPHPHTDTKEISELRNILTQLQPGTLGRSAHMVLSAARRVPPV
SVASPKNNHAEPGSSHPDRAEPRAEEQNSENDVGRMKRRKVQHQRPLSNSNSWPNRRETT
RARQKKQHRPQAQSSGGQDSGQCPICAGSFRIEILPQHAATCGETSPPHPVSPSSSSSSS
QSVLRFHCVALTPVPLVPRPLHSFIRQQPNWTEIVNRKLSFPPPLLGVIQEGRLGLVQQL
LESGVEATRSGPGWPLWNVEGAEDHSWREALILAIRLGREAITDVLLASVKFDFCQIHEA
LLVAVDANQPAVVRRLLARLEREKGRKVDTRSFSLAFFDSSIDGSHFAPGVTPLTLACQK
DLYEIAQLLMEQGHTIARPHPVSCACLECSNTRRYDLLKLSLSCINTYRGIASRAHLSLA
SEDAMLAAFQLSREFRRLARKEPEFKPEYIALESLSQDYGFELLGMCQNQSKVPAVLNDL
AEDSETEPKAEGLGLAFEEGILNLARLRLAINYNQKWYIAHPICQQVLSFIWCGKLAGWR
GSTTSWKLFVAFLIFLTMPFLCLGYWLAPKSQLGRLLKIPVLKCLLHSASYLWFLIVLLG
ESLVMETQLSTFRGRSQSVWENSLHMIWVTVLSMMLKDPHLVKALSRFQCMWKLFNETFQ
FLFWTMFGMEEHSVVDMPRFLVPEFGGRALYGIFTIVMVIVLLNMLIAMITNSFQKIEDD
ADVEWKFARSKLYLSYFREGLTLPVPFNILPSQKAVFYLLRRICQFICCCCSCCKTKKPD
YPPIPTSANPRAGAVPGEGERGSYRLRIIKALVQRYIETARRKFEETRRKDLGNRLTELT
KTISXLQSEVASVRRTLAEGGTLRPPDGASVLSHYIIQVHNSFQNLGPPIPETPELTGPG
IVGTQESSGTGLQDTGGVTTLASGESGXPAHVLVHREQEAEGAGDLPQGEDSGTERRS
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtgaagatcagccatgtggtatcattttcttctcaggatcccaagtatcct
gtagagaacttgctaaacccagatagtccaaggagaccttggctcagctgccctcaggac
aagagtgggcaattgaaagtagaactacagctggagagggcagtgcccattggctacatt
gatgtgggtaactgtggctgtgcgttcctgcaaattgatgtgggccgttcttcctggccc
ctggacagacctttcataaccctgctccctgcaaccatgctaatgtctctaactgattca
aagcaggggaagaaccgctccggggtccgcatgtttaaagatgttgatttcctggctcca
gcctcaggagagttatgggatcgacttcgcctgacctgctcccaacctttcacgcgtcat
cagtcctttggcctggcctttctacgggtgcgttcttctctggactccttagatgactct
gtggtgggtccctcagcccttgtgagctctgtgctgaacaagggttcttctgatgctgag
gagtctggtcctagcccctggctagctaatccttccatccggaggacattcttcccacat
ccccatacggacaccaaggaaatttcagagctcaggaatatcctaacacagctgcagcca
gggactctggggcgttcagcccacatggtgctttctgctgcccgcagggtgcctccagtc
agtgtggcaagcccaaagaacaaccatgcagaaccaggttccagtcatccagacagggca
gagcccagagcagaggagcaaaactctgagaatgacgtgggcaggatgaaaagaaggaaa
gtgcagcaccaaaggcctttatccaactctaattcttggccaaacaggagggagacaaca
agagcacggcaaaaaaaacagcaccgaccccaggcccaaagcagtggtggccaggatagt
ggacagtgcccaatttgtgcaggttccttcaggattgagattcttccccagcatgctgcc
acttgtggagagacctccccacctcacccagtttctccctcctcatcatcatcttcgtcc
cagtctgtactaagatttcactgtgtggcactaacaccggttcccctggtccccaggcct
ctccactccttcatccgccaacagcctaactggactgagatcgtgaacaggaagctcagc
ttcccacctccactcctgggtgtcatccaggagggccgactgggccttgtgcagcagctg
ctggagtcaggggttgaggccacaaggagtgggccaggctggcccctgtggaatgtggaa
ggggctgaggaccactcctggagggaggcactcatcctggctatccgcctgggccgtgag
gccatcaccgatgtgctgttggccagtgtcaagtttgacttctgccagatccacgaggcc
ctgctagtggcagtggacgcaaaccagccagcagtggtgcgtcgcctgctggcccggctg
gaacgggagaagggtcgcaaagtagacaccaggtctttctcactggctttctttgactca
tcaattgatggctcccactttgcacctggtgtgactcccctcaccctggcctgccagaag
gacctgtatgagatagcacagctgctcatggaacagggccacaccattgcccggccccac
ccggtctcctgtgcctgcctcgagtgcagcaacacccgccgctatgacctgctgaaatta
tctctgtcctgcatcaacacctaccgtggcatcgccagcagggcccacctctcactggcc
agtgaggacgccatgctggctgccttccagcttagccgtgaattcagacgccttgcacgc
aaggagcctgaatttaagcctgagtacattgccctggagtcactgagccaggactatggc
tttgagctgctgggcatgtgccagaaccagagcaaggtccctgcagtgctcaacgacctg
gccgaggacagcgagactgagcccaaggctgaaggcctgggcctggcctttgaggaaggc
atcctcaacctggcgaggctgcgactggccatcaactacaaccagaagtggtacatagca
caccccatctgccagcaagtcctgtccttcatctggtgtgggaaactggctggttggcgt
ggaagcaccaccagctggaagctctttgttgccttcctcatcttcctcaccatgcccttc
ctctgccttggctattggctggcaccaaagtcacagctgggccgcctgctaaagatccca
gtattgaagtgcctgctgcactctgcctcctatctgtggttcctcatcgtcctgctggga
gagtccctggtcatggagacacagctgagcaccttccgtggccgcagccagagtgtctgg
gagaattcactacacatgatttgggtcacagttttatcgatgatgctaaaggacccacac
ttggtcaaggctctctcacggttccagtgtatgtggaagcttttcaatgagacgtttcag
tttctgttctggaccatgttcggcatggaagagcacagcgtggtggacatgcctcggttt
ctggtgcccgagtttggaggccgggccctctatggcatctttaccatcgtcatggtcatt
gtgctgctcaacatgctcattgctatgatcaccaactccttccagaagattgaggatgat
gctgacgtggagtggaagtttgctcgctccaagctctatctgtcctacttccgagagggc
ctgacactgcctgtgcccttcaacatcctgccctcccagaaggctgtcttctaccttctc
aggagaatttgccagttcatttgctgttgctgttcctgctgcaaaaccaagaagccagac
tatccccccatccctacttctgccaatcccagggcaggggctgtgcctggggagggagag
cgtggatcctaccgccttcgcatcatcaaggccctggtacagcgctacatagagactgcc
cggcgcaaattcgaggagacccggcggaaagacctgggcaacagactcacagagctgacc
aagaccatatcttgactgcaaagcgaggtagccagtgtgcggcgaactctggcagaggga
gggacactccggcctcccgacggtgccagtgtcctcagtcactacatcatccaagtgcac
aacagcttccagaacctggggcctcccatccctgagaccccagagctgacaggacctggg
attgtggggacccaggaatcatcaggaaccgggcttcaggacactggaggggtgacaact
ctggcttctggagagtctggcnnccctgctcatgtgctagtgcatagggagcaggaagca
gagggggctggagacctgcctcagggggaggattcggggactgagaggaggtcctga
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