Polaromonas sp. Pch-P: F7R28_03725
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Entry
F7R28_03725 CDS
T06273
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
poo
Polaromonas sp. Pch-P
Pathway
poo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
poo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F7R28_03725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poo03400
]
F7R28_03725
Enzymes [BR:
poo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
F7R28_03725
DNA repair and recombination proteins [BR:
poo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
F7R28_03725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QGJ17589
UniProt:
A0A5Q3HB38
LinkDB
All DBs
Position
complement(807029..807895)
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AA seq
288 aa
AA seq
DB search
MFKLTSLNLNGIRSAASKGLQDWIAQSMPDCICVQELKAQAADISGRFEEIAGLKGHFHF
AEKKGYSGVGVYTRHEPTDVIVGYGSSEFDAEGRYIELRFDRPGRKHSPKLSIISCYFPS
GSSGEERQAAKFRFLAEFYPRLLALKETRDFVLCGDINIAHQEIDLKNFKGNKKNSGFLP
EERAWMTELLRDAELANEAADELTERTDASVRGGGIVDVYRKLQPTTTDAAYTWWSNRGQ
AYAKNVGWRLDYHLATPAFAALARSEHIYKEQRFSDHAPMSVDYEFKL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaattgaccagcctcaacctcaacggtatccgctccgcagccagcaaaggcctg
caggactggatagcacagtccatgccggattgtatttgcgtgcaggagctcaaggcgcag
gcggccgacatcagcggacgcttcgaagaaatcgccgggctgaagggccatttccatttc
gccgagaagaaaggctattcgggcgtcggcgtctacacacgccacgagcccaccgacgtg
atcgtgggctacggctcgagcgaattcgacgccgaaggccgctacatcgagctgcgcttt
gaccggccgggccgcaagcacagccccaagctttcgatcatcagctgctatttccccagc
ggctcgtcgggcgaagagcggcaggcggccaagttccgcttcctggccgagttttacccg
cgcctgctggcgctgaaagaaacgcgcgacttcgtgctgtgcggcgacatcaacatcgcc
caccaggaaatcgatctgaagaacttcaagggcaacaaaaagaacagcggcttcctgccg
gaagagcgcgcctggatgaccgaactcctgcgcgacgccgagctggccaatgaagcagcc
gatgaattgacggagcgcacggacgcctccgtcaggggcggcggcatcgtcgacgtgtac
cgcaagctgcagcccaccaccaccgacgcggcctacacctggtggagcaaccgcggccag
gcctatgccaagaacgtcggctggcgcctggactaccacctggccacaccggcatttgcc
gcactggcgcgcagcgagcacatctacaaggaacagcggttttcagaccacgcgccgatg
agcgtggactatgaattcaagctctga
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