Populus trichocarpa (black cottonwood): 112324083
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Entry
112324083 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC112324083 isoform X1
KO
K18667
activating signal cointegrator complex subunit 2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
112324083
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GFIT
Motif
Pfam:
SPOC
RRM_1
API5
Motif
Other DBs
NCBI-GeneID:
112324083
NCBI-ProteinID:
XP_024440760
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Position
14:complement(1039456..1046217)
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AA seq
1253 aa
AA seq
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MDAAEQPLKKRKLYEQQPEEPPPKTLDESPTTLAPPPPPPLSQEEINARRRNRDEIKSVY
ETYKRLKFFVSQKEGRHMPDLEQSYLALITASRGCTSVQRIVADLIPRYASHCPTALEAA
TKVVINMHNWSLAVINRGEDFDGVAMGTAKACIFGLVDICRTASLEAPTSAVIRGICSAV
FQNVLSFFVSSFEGKDIFQIVDKETLKIQDDLKIFSELKQKFDDEDGISLVKLSKLCALS
MLWILFSCPKDLFAACFELFKSTVPERVQERNFFLSQVTSIIADDAVPLANASDGTTSRE
GSVGPSAKSYDVSGELPLDGNHVSEDASSPKNCLLRLVLGNNASLRSWMFSKYKKLCNMT
SFIAASDIRSALEGICKSFAEFNKLDDSQIDSDGDDSDPSKFVNRQFPVPRMSNEHEVSG
EPAGTGHHKGGSRSMDFEMNHLGDSSHGRSSMPRDLSNQSVLSPATRTPLDFRSNSFDGR
NFNVHVGKNPASNMEFSLPALRSPSGGISNSFSPKHHLAAPYGSIAETVWFCDGDPAAMD
VFSASRQLWLGSLGPDASEAHMRYELERFGPIEQFVFFPVKGFALIEYRNIFDAIRAREY
LRTHFPWWIKFMDIGLGARGAMNGVAVGSSCHVYVGHISSQWARDEILHESRKVIFKGPR
MVTDLTNEGAVLMEFETPEEATAVMVHLRLHRKGQLHHVPALNEGSANAVLPQLDGTRSA
SAAIHADIRTNHSVSMFNSATESPRTQNVPQSPADNSRTRMSNLSSLLASLRTKYNINQN
PNYFDNYVPGSSMAPSSRDADREPSSTLWICLPNVNSPSLNDDELMAVCNLAIANVGSIV
KLTRANMHIGCGWFLECTNVDAAITVLKNLRSCHGTFFQIEFSQPEKNAAAFSIKPEGGS
TELVSPQIKSENHATPVQGVHAFGVVDPSPGGGHAVPAAPEPMWMYKNNEIELLQPPVSI
SCAPTGTHGPPIPPPQQFQPPTFMRPVYLPPNNSWDPRGLNHVALNPISPATMPNSFQGS
SVASPFIPASVTPLAQVQRAPVQHLDQMFPRSAVPPTLSSMPLQPEIPPPLPPSPPPAPP
PPSSPPPPPPVAESTDAESSGNSMLYQWQGTLCKSGVHYCKIFAQRVDSDICKYSDAMSE
PAGWPAKLDMTKRTVFRHVKSTFTSTPPHKREVCRLIPLSANDQKGFQDFISYLKQRECA
GVIKIPSGKSIWTRILFILPYSQDTCSMLSIAPDTSNCLIGLVLPKETNFDWV
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgcagagcagccactcaagaagcggaagctctacgagcaacaaccagaagaa
cctccaccaaaaactctggacgagtcacctaccactttagcaccaccaccaccaccacca
ctgtctcaagaagaaattaacgcgagacggagaaacagagatgagattaagagcgtctac
gaaacttacaagcgtctcaagttttttgtttctcagaaagaaggacgtcacatgcctgac
ctcgaacaatcttatctcgcactcattactgcttcaagaggttgtactagtgtgcaacga
attgtagctgatcttattcctcgatatgcttcacactgtccgactgctcttgaagcagcg
actaaagttgtaatcaacatgcataactggagcttggcagtgataaatagaggagaggat
tttgatggtgttgcaatggggacagctaaagcatgtatttttggtttagttgatatctgt
cgaactgcttctttggaagctccaacatcagctgttattagaggcatttgctctgcggtt
tttcagaatgtgttgtcattctttgtgtcatctttcgagggtaaggatatctttcagatt
gttgataaggaaactttgaagatacaagatgatctcaagatcttttcggagttgaagcaa
aagtttgatgatgaggatggaatttcgttggttaaattgtccaagttgtgtgccttaagt
atgctctggattttattttcttgccctaaagatttgtttgctgcctgttttgagctcttt
aaatcaactgttccagaaagagtccaagaaagaaacttttttcttagtcaggtgaccagc
attatagctgatgatgctgtgcctctggctaatgcaagtgatggaactacctctcgtgaa
ggatctgttggaccaagtgccaaaagctatgatgttagtggcgagttgcctttagatggt
aaccatgtttcagaagatgcatcttcaccaaagaactgcttgttgagactggtccttggc
aataacgcatctttgagaagctggatgttctcaaagtacaagaagttgtgcaacatgaca
tcttttatagctgcatcagacattagatctgctctagaaggaatctgtaaatcatttgca
gaattcaataaactagatgacagtcaaattgacagcgacggggatgattctgatccatca
aaatttgtaaatcgacaatttccggttcctaggatgtctaatgaacatgaagtctctggt
gaaccagctggtactggtcatcataaaggagggtcaaggtccatggatttcgagatgaat
caccttggagactcttcacatggcaggtcttccatgcctagggatctatcaaaccaatct
gtgctttcacctgctacaagaactccattagacttcaggagcaattcatttgatggtaga
aactttaatgtccatgtgggcaaaaatccagcttcaaatatggagtttagtttacctgcc
ttgagatctcccagtggaggcataagtaattctttttctcctaaacatcatttggcagca
ccatatggttccatagctgaaactgtttggttctgcgatggggacccagctgcaatggat
gttttttctgcttctagacagctttggttgggttctttaggtccagatgcatctgaagct
catatgaggtatgagcttgagaggtttggtcctatagaacaatttgtcttctttccagtc
aaaggatttgccttgattgagtataggaacatatttgatgccattagggctcgggagtat
ttgcgtacccatttcccttggtggatcaaattcatggatataggactgggagccaggggt
gctatgaatggtgttgcggttggctccagttgtcatgtttatgttggacatatttcaagc
caatgggctagggatgaaattctgcatgaatcaaggaaagtgattttcaaggggccacgc
atggtcactgatctcaccaatgaaggagcagtactgatggagtttgaaactcctgaagaa
gcaactgctgtgatggtacatctcaggctgcatcgtaaaggacaactccaccacgtgcct
gctttgaacgagggatcagctaatgctgtgttgcctcagttagatggtacaagatcagca
tcagctgctatccatgctgacattagaaccaatcactcagttagcatgttcaatagtgca
acagaatcgcctcgtacccaaaatgtaccccagagtcctgctgacaactctaggacaagg
atgtctaatttatcttccttacttgcttcattgcgtacaaaatataatattaatcaaaac
ccaaattattttgacaactatgtacctggaagcagcatggctccttcttcgagggatgct
gatcgagagccatcaagcacactttggatttgtcttccaaatgtcaactccccttccctt
aatgatgatgagctgatggctgtttgcaatcttgctattgccaatgtagggtctatagtc
aaattgacacgagcaaatatgcatatagggtgtggttggtttcttgaatgcaccaacgtt
gatgctgcaatcactgttttgaaaaatctccgcagttgtcatgggacattctttcagatt
gagttcagtcagccagaaaagaatgctgccgcattctcaatcaagcctgaaggtggctcc
acagagcttgtatccccacaaataaaatcagagaatcacgcgactcctgtacaaggtgta
catgcatttggggtggtggatccttcgccaggaggtggtcatgctgttcctgctgcacct
gaaccgatgtggatgtacaagaacaatgaaattgagctgctccagccacctgtaagcatt
tcatgtgctcctacaggaacacatggaccaccaataccgccaccacagcaattccagcca
cctacatttatgcgacctgtttaccttcctccaaacaattcatgggatccacgaggctta
aatcatgttgcactgaacccaatctcaccagcaacaatgccaaatagctttcaaggaagc
tctgttgcatctccttttatacctgcttctgttactccactagcacaggtacagcgggct
ccagtgcagcacttggaccaaatgtttcccagatctgctgtaccaccaactttatcatct
atgccacttcagcctgaaatacccccaccattgcctccatctccaccacctgctcctcct
ccacctagttccccacctccacctccacctgttgcagaatcaactgatgcagaaagttct
ggaaactctatgttatatcagtggcagggcacattatgcaaaagcggggttcattactgt
aaaatttttgcgcaaagagtggattcagatatttgcaagtattcagatgccatgtctgaa
cctgctggatggcctgctaaactagacatgacgaaacgcacagtttttcggcatgtaaaa
tcaacatttacaagtaccccaccacacaaaagggaagtatgccgattgatccccttgtct
gcaaacgaccaaaagggctttcaggatttcatatcatatttgaagcagagggaatgtgca
ggagtaattaaaatcccatctgggaaatccatatggacaaggattctcttcatccttccc
tactcacaagatacttgttccatgctctcaattgcccccgatacatcaaactgcctgatt
ggtttagttttgccaaaagaaacaaacttcgactgggtttaa
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