Populus trichocarpa (black cottonwood): 112327877
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Entry
112327877 CDS
T01077
Name
(RefSeq) leucine-rich repeat extensin-like protein 1 isoform X1
Organism
pop
Populus trichocarpa (black cottonwood)
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GFIT
Motif
Pfam:
LRR_1
LRR_8
LRR_4
LRRNT_2
Motif
Other DBs
NCBI-GeneID:
112327877
NCBI-ProteinID:
XP_052309917
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Position
6:6024199..6027098
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AA seq
851 aa
AA seq
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MSSPPRLFLILFLLVSTSSFLFQISSAAHEDEDHDIDVDPNLKFENPRIRRAYIALQSWK
QAIYSDPLNFTANWKGSDVCSYMGIFCAPSPQNKKVRVVAGIDLNHADIAGYLPTELGLL
TDLALFHINSNRFCGVVPNSFSKMKLLHELDLSNNRFVGKFPKVVLSLPSLKYLDLRFNE
FEGSVPSQLFDKPLDAIFLNDNRFQFGIPENLGNSPVSVLVFANNNLGGCIPGSIGKMGK
TLNEIILMNDNLTGCLPPQIGMLKEVTVFDVSFNHLQGSLPSSIGNMKSVEQLDIAHNSF
TGAIPASVCQLPNLQNFTFSFNYFTGEAPSCAAIGGVSNGTQNCIPGKTNQRSAKQCSSE
AARPVDCSKFKCGGGGGGGGSGSPLTPPPRSWRGSPVRRPAPNPAPIRKPFFASPPPPPP
TSKSSPSTRSHPPPPPTRSFHPPPSPHFASPPPPSKKVSPRTHLPPPPPPPPSPPPPVEQ
QPPTYHHIPPPPSPPPPPSHYHSNHPAPPPIEKVSPGTHYHVPPPPPSHQYQAPPPPKQS
AEVPAPSYHPNSPPPPPPSCQYQAPPPPKQSAEVPAPSYHTNSPPPPPPPTNGYTHSPPP
TQPTAPVPSPVEYYPPKAASSPPPPPLYQTPPSPSYHTNSPPPPPPPTNGYTHSPPPTQP
TAPVPSPVEYYPPKAASSPPPPPPPPPLYQTPPSPPPPSEEPWLPLPPPPSTGCITPESP
PPPSPTPSYQHPHPPPPPPTPSYHHPQSPSPPPPPPMSSYEHPQSPPPPPPVPSYHHPQS
PPPPPHQQQWHYPPSISHQQSPPPPPHNSYAPPPPPPTPSPPPPAIENTVPLPPIVGVSY
ASPPPPTIPYY
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcctcctcgcttattcttgattcttttcttgcttgtttccacttcctctttc
ctcttccagatctcctctgcagcccatgaagatgaagatcatgatatagacgtagatcca
aacctcaagtttgagaaccctaggatccgcagagcctacattgccttgcagtcatggaaa
caagccatctattcagacccactcaacttcacggccaactggaagggctcagacgtgtgc
tcttacatggggatcttttgtgctccatctccccagaacaagaaagtaagggtggtggct
ggcattgacctcaaccatgctgacattgctggctacctccctaccgagctcggccttctt
accgatctggcactcttccacatcaactccaacagattctgtggagtggtgcccaatagt
ttcagcaaaatgaagcttctacatgagctggaccttagcaataatcggtttgtgggcaaa
tttccgaaggttgtgctctcactgccttccctcaagtacttggatctgcgcttcaacgag
tttgaaggttctgtgccctcccagctctttgacaagcctcttgatgctatcttcttgaac
gacaacaggttccagtttggcatcccagagaatcttgggaactctcctgtttctgttctt
gtctttgcgaacaacaaccttggtgggtgcattccaggcagcatcggaaagatgggcaaa
accctgaacgagatcattctcatgaacgacaatctcactggatgcttgcctccccagatc
gggatgctcaaggaagtaactgtttttgacgtgagcttcaatcatcttcaaggctctctc
ccttccagcattggaaacatgaagagtgttgagcaacttgacattgcacacaatagtttc
acaggtgctatacctgccagtgtttgccagttgcctaatttgcaaaacttcaccttttct
ttcaactatttcactggcgaagctcctagctgtgctgctatcggaggcgtctccaatggt
acccagaattgcattcctggaaagacaaatcagagatcagccaagcaatgttcttctgaa
gctgcacgccctgttgactgcagcaagttcaaatgcggtggcggtggtggcggaggtgga
agtggctctccattaacaccaccaccacggtcgtggagaggttctccagttagaaggcca
gcaccaaatcctgcacccattagaaagccattctttgcatcaccaccaccaccaccaccc
acttccaagtcttcaccttccaccagatcacaccccccaccacctcctacaaggtctttc
catccgccgccatctccacattttgcatccccaccaccgcctagtaaaaaagtatcgccc
agaacacatcttccaccaccaccgcctccacccccatctccacctccacctgtagaacaa
cagccaccaacttatcaccatataccgccaccaccatctcctcctcctccacccagccat
taccattcaaatcatccagcaccgccacctatcgaaaaagtctcacccggtactcattac
catgtaccaccacccccgccttcccatcaataccaagcaccaccgccaccaaagcagtca
gctgaagttccagcaccaagttaccaccctaactctccaccaccacccccgccttcctgt
cagtaccaagcaccaccgccaccaaagcagtcagccgaagttccagcaccaagttaccac
actaactctccgccaccaccccctccaccaactaatggatatacacattctcctcctcca
acccagcctacagctccagttccatcaccagtagagtattacccacctaaagcagcttct
agtccacctccacctccattgtatcagacgccaccatcaccaagttaccacactaactct
ccaccaccaccccctccaccaacgaatggatatacacattctcctcctccaacccagcct
acagctccagttccatcaccagtagagtattacccacctaaagcagcttctagtccacct
ccacctccacctccacctccattgtatcagacgccaccatcaccgccgccgccttcagaa
gaaccatggcttcccctaccacctccaccatcaactgggtgtatcactccagaatcgccg
ccgccgccatcacctacaccaagctatcagcacccacacccgccgccgccgccacctacc
ccaagctaccaccacccgcaatcaccatctccaccaccaccaccacctatgtcaagctat
gaacacccacaatcacctccaccaccgccacctgtgccaagctatcatcatccgcaatca
cctccacctccccctcatcaacaacaatggcattatccaccatcaatatcccatcaacaa
agtcctccgccacctccccataattcatatgcaccaccaccaccaccgccgactccatcg
ccgccgccgccagcaattgagaacacagttccacttccaccgattgtaggagtatcgtat
gcatctcctcctcccccaacaattccctactactaa
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