Populus trichocarpa (black cottonwood): 18096651
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Entry
18096651 CDS
T01077
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 15a isoform X1
KO
K14972
PAX-interacting protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
18096651
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
18096651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KIX_2
Med15
KIX
Motif
Other DBs
NCBI-GeneID:
18096651
NCBI-ProteinID:
XP_024448044
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All DBs
Position
3:2936895..2946318
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AA seq
894 aa
AA seq
DB search
MDANNWRLTAPGGEPVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELKKI
AVRFEEKIYTAATNQSDYLRKISLKMLTMETKSQNTIPTGNGNKPLDPGASHSMPPQVHN
QGQSLPISLSSNQPQARQQLSQNMQNSMSSNGVQSSAGLQSAMPSVSSLTQTIANTVGQN
ANMQSISGVSQNPVGNLMGQGIPSNMFVNSQRQMPGRQQVVPPQQQQQSQNPQQYLYQQQ
IQQQLLKQKLQQGNHPHSLVQSHIHQQQQQQNLLQPNQLQSGLQTSTVMQPSMMQTVSGL
QQNQPSSVQQSTQPMLQQHPQSVLRQQQQPQQSAGIHQQQTPMMQQPLLPPQQQLMGQQS
NTTNMSQNQLIGQQNIVGDLQQQQLGQQNNLQNLQQQQLMAQQNNLSSMHQQQLGPQSNV
TGLRQQQLLGAQPASLDSTAEIGHANGADWQEEIYQKIKVMKETYLPEINELYQRIATKL
QQHDPLPQQPKSEQLEKLKVFKVMLERLITFLQVSKNNITPNFKEKLGFYEKQIVGFLNP
SRYRKPIPNLQQGQPPQPRIQPMQQPQSQVPQLQSHENQLIPQLQSMNTQGSVPQMQQNN
MSSLLHNFLSTLSGDSTSQSNMMNPIQPGSNLDSGQGNALSSLQQTPVGSVQQNLVSISQ
PTKINTLSTQSGGSMLQPNIPLQSNSNMIQHQHLKQQQQQQQQHEQQMLQTQQLKRFQQH
QNLMQNQQMQQQQLHQQAPSPMPGDSDKPVSGISSLLNTGNIVHQPSVAQALAPSLAIGT
PGISASPLLAEFTSPDGAHGSALTTVSGKSNVTEQSLECLIKAVKSLSPKALSASVGDIG
SVVSMIDRIAGSAAGNGSRAAAGEDLVAMTGCHLLSFLSFLFFTCFSQHGNSRE
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaataattggaggctcactgccccaggcggagaacctgtgatggacacaggt
gattggagaactcaattgcagcctgactcacggcaaagaatagtcaataaaataatggag
acattaaagaggcatcttccgttttctggtcaggagggattacaagaactcaagaaaatt
gccgtacggtttgaggaaaagatttatactgccgccaccaatcagtctgattatctgcgt
aaaatatctctgaagatgcttacaatggagaccaagtctcaaaataccatacccactggc
aatggtaacaaacccctggatccaggagcatctcatagtatgccgcctcaagttcacaac
caagggcagtcgctccctatctcattgtccagtaatcagcctcaagcacgtcagcagtta
tcacaaaacatgcagaatagtatgtcatctaatggagttcaaagttctgctggtttacaa
tcagcaatgccttctgtctccagtttaacccagactatcgcaaacactgttggacagaat
gctaacatgcagagtatctctggtgtttcacagaacccagttgggaatttaatgggacaa
gggattccctccaatatgtttgtcaattctcagagacaaatgccaggcaggcaacaggtt
gttcctccacagcaacagcagcagtcccaaaatcctcagcagtatctttatcagcagcag
atacaacaacagcttttaaagcagaagcttcaacagggaaatcatccacactcacttgtg
caatctcacatccaccagcagcagcagcagcaaaacttgttacagccaaatcagttgcaa
tctggtttgcaaacatcaactgttatgcagccttcaatgatgcaaaccgtctctggtctt
caacagaaccaaccatcttctgttcaacagtcaacacaaccaatgctccagcaacatcca
caatcagtcctcaggcagcagcaacaacctcaacaatctgctggtattcatcagcagcaa
acaccaatgatgcagcagccactattgcctccacaacagcagctaatggggcaacaatca
aataccactaacatgtcgcaaaatcagttaattggacagcaaaacattgttggggacttg
cagcagcagcagctagggcagcagaataaccttcaaaatctgcagcagcagcagttaatg
gctcaacaaaataacctctcaagcatgcatcagcagcagttgggccctcaaagtaatgtc
actggtttacggcagcagcagttgcttggagctcagcctgcatccctagattctacagca
gagattggacatgcaaatggtgctgattggcaagaggagatctaccaaaagatcaaagtt
atgaaggaaacgtatttgcctgaaataaatgaattgtaccagagaattgctaccaagtta
cagcagcatgaccctcttccacaacaaccaaagtcagaacagcttgaaaagctgaaggta
ttcaaggtcatgttggagcgcttgataacattcttacaggtctctaaaaacaacatcaca
cctaatttcaaggagaaattgggtttctatgagaagcagattgtaggttttctaaaccca
agcagatacaggaagcctattcctaatctacagcaaggacaacctccccaacctcgtatt
caacctatgcagcaaccccaatctcaagttcctcaattgcagtcccatgaaaatcaactg
attccccagttgcaatcaatgaatacgcaaggttctgtaccacagatgcagcagaacaat
atgtcaagcttgctgcataatttcctttcaactttatctggggattcgacgtcacaatca
aacatgatgaatccaatacaaccaggctccaatttagattctggacaaggaaatgcactg
agctcattgcagcagacacctgtaggatctgtacaacagaatctcgtgagcatttcccaa
ccaaccaaaattaacacattgtcaacacaaagtggggggagtatgctgcagccaaatatt
ccccttcagtcgaattccaatatgattcaacaccagcatctaaaacagcagcagcagcag
cagcagcagcatgaacaacagatgctacaaacacaacagcttaaacgattccagcaacac
cagaatttaatgcagaatcaacagatgcagcagcagcaattacaccagcaagctccgtct
cctatgccaggagattctgacaaaccagtttctggtatttcctcactcttaaatactgga
aatattgtacaccaaccatctgttgcacaagcactggctccatcccttgcaattggcact
cctgggatatctgcatcacctttgcttgcagagtttaccagtcctgatggtgctcatggc
agtgctttgacaactgtttctggcaagtcaaatgttacagagcaatcacttgagtgcttg
attaaagcggtgaaatctctgtctcccaaagcacttagtgcatctgtcggtgacattggc
tccgttgtcagtatgattgacagaattgctggttctgcagctggtaatggatctagagct
gcagctggtgaggatttggtagcaatgacaggatgtcatcttctttcgtttttgtctttt
ttatttttcacgtgtttctcacaacatgggaactcgagggaataa
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