Populus trichocarpa (black cottonwood): 18096675
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Entry
18096675 CDS
T01077
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 15a isoform X1
KO
K14972
PAX-interacting protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
18096675
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
18096675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KIX_2
Med15
KIX
Motif
Other DBs
NCBI-GeneID:
18096675
NCBI-ProteinID:
XP_024453776
LinkDB
All DBs
Position
3:3229483..3240623
Genome browser
AA seq
1331 aa
AA seq
DB search
MDANNWRPTAPGGEPVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELKKI
AVRFEEKIYTAATNQSDYLRKISLKMLTMETKSQNTIPTGNGNKTLDPGASHSMPPQVHN
QGQSLPNSLSSNQSQARQQLSQNMQNSMSSNGVQSSAGLQSAMPSVSGLTQTIPNTVGQN
ANMQSISGVSQNSVGNSMGQGIPPNMFVNSQRQMPGRQQVVPPQQQQQSQNPQQYLYQQQ
MQHQLLKQKLQQGNHPHSLVQSHIHQQQQQNLLQPNQLQSSQQSGLQTSTVMQPSMMQTV
SGLQQNQPSSVQQSTQPMHQQHPQSVLRQQQQQPQQSAGIHQQQTPMMQQPLLPPQQQLM
GQQSSTTNMSQNQLIGQQNIVGDLQQQQQQRLLGQQNNLQNLQQQQQLMTQQNNLSSMHQ
QQLAPQSNVTGLQQQQLHGAQPGNSSMQSNQHSLHMLQQPKVTLQQQAQQSGSGLLPNQG
QQSHSQLPQQQLMAQIQSQPGQLQQQSNPLQRDLQQRLQASGSLLQQPNVIDQQKQLYQP
QRALPETSSTSLDSTAETGHANGADWQEEIYQKIKVMKETYLPEINEMYQRIATKLQQHD
PLPQQPKSEQLEKLKLFKVMLERLIGFLQVPKNNITPNFKEKLGSYEKQILGFLNPSRYR
KPIPNLQQGQLPQPHIQPMQQPQSQVPQLQSHENQLNSQLQSINMQGSVPKMQQNNMSSL
LHNSLSTLSGDSTSQSNMMNPIQPGSNLDSGQGNALSSLQQTPVGSVQQNLVSISQPTNV
NTMSTQSGVSMMQPNMPLQSNSNMIQHQHLKQQQQHEQHMLQTQQLKRMQHRQNLMQNQQ
MLQQQQQLHQQAKQQLPAQMQTHQIPQPQQMNDVNEMRQGIGIKPAVFQQHLPTAQRTAF
PRQHMKPAPSFPISSPQLPQHASPQLQHSSPQIDQQNLPSSVTKTGTPLQSANSPFVVPS
PSTPLAPSPMPGDSDKPVSGISSLLNTGNIVHQPSVAQAPAPSLAIGTPGISASPLLAEF
TSPDGAHGGALTTVSGKSNVTEQPLERLIKAVKSLSPKALSASVGDIGSVVSMIDRIAGS
APGNGSRAAAGEDLVAMTKCRLQARNYITQDGMTGSRKMRRHTSAMPLNVVSSAGSVSDS
FKQFTGPETSDLESTATSSVKRPRIEANHALLEEIREINQRLIDTVVDISDEDVDSTAVA
ATAEGGEGTIVKCSFSAVALSQNLKSQYASAQMSPIQPLRLLVPTNYPSCSPILLDRFPV
EVSKEYEDLSIKAKSRFSISLRSLSQPMSLGEIARTWDVCARVVISEHAQQSGGGTFSSK
YGSWENCLSAA
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaataattggaggcccactgccccaggcggagaacctgttatggacacaggt
gattggagaactcaattgcagcctgactcacggcaaagaatagtcaacaaaataatggag
acattaaagaggcatcttccgttttctggtcaagagggattacaagaactcaagaaaatt
gccgtacggtttgaggaaaagatttatactgccgccaccaatcagtctgattatctgcgt
aaaatatctctgaagatgcttacaatggagaccaagtctcaaaataccatacccactggc
aatggtaacaaaaccctggatccaggagcatctcatagtatgccgcctcaagttcacaac
caagggcagtcgctccctaactcattgtcctctaatcagtctcaagcacgtcagcagtta
tcacagaacatgcagaatagtatgtcatctaatggagttcaaagttctgctggtttacaa
tcagcaatgccttctgtctccggtttaacccagactatcccaaacactgttggacagaat
gctaacatgcagagtatctctggtgtttcacagaactcagtggggaattcaatgggacaa
gggattccccccaatatgtttgtcaattctcagagacaaatgccaggcaggcaacaggtt
gttcctccacagcaacagcagcagtcccaaaatcctcagcagtatctttatcagcagcag
atgcaacatcagcttttaaagcagaagcttcaacagggaaatcatccacactcacttgtg
caatctcacatccaccagcagcagcagcaaaatttgttacagccaaatcagttgcaatct
tctcagcaatctggtttgcaaacatcaactgttatgcagccttcaatgatgcaaactgtc
tctggccttcaacagaaccaaccatcttctgttcaacagtcaacacaaccaatgcaccag
caacatccacaatcagtccttaggcagcagcagcaacaacctcaacagtctgctggtatt
catcagcagcaaacaccaatgatgcagcagccactattgcctccacaacagcagctaatg
gggcaacaatcaagtaccactaacatgtcgcaaaatcagttaattggacaacaaaacatt
gttggggacttgcagcagcagcagcagcagagattgctagggcagcagaataaccttcaa
aatctgcagcagcagcagcagttaatgactcaacaaaataacctctcaagcatgcatcag
caacagttggcccctcaaagtaatgtcactggtttacagcaacagcagttgcatggagct
cagcctggtaactcaagcatgcaatctaatcagcactctctacacatgctgcaacagccc
aaggttacgctgcagcagcaagcacaacaaagtggaagtggtttgttgccgaatcaaggg
cagcagtcacactcacagctgccacagcagcaattgatggcacagattcaatcacagcct
ggacagctgcaacagcaatcaaatccattacaacgtgatctgcagcaaaggcttcaagca
tcaggctccttgcttcaacagccgaatgtgattgatcagcaaaagcagttatatcaacct
caaagagcccttccagaaacgtcctcaacatccctagattctacagcagagactggacat
gcaaatggtgctgattggcaagaggagatctaccaaaagatcaaagttatgaaggaaacg
tatttgcctgaaataaatgaaatgtaccagagaattgctaccaagttacagcagcatgac
cctcttccgcaacaaccgaagtcagaacagcttgaaaagctgaagttattcaaggtcatg
ttggagcgcttgataggattcttacaggtccctaaaaacaacatcacacctaatttcaag
gagaaattgggttcctatgagaagcagattctaggttttctaaacccaagcagatacagg
aagcctattcctaatcttcagcaaggacaacttccccaacctcatattcaacctatgcag
caaccccaatctcaagttcctcaattgcagtcccatgaaaatcaactgaattcccagttg
caatcaataaatatgcaaggttctgtaccaaagatgcagcagaacaatatgtcaagcttg
ctgcataattctctttcaactttatctggggattcgacgtcacaatcaaacatgatgaat
ccaatacaaccaggctccaatttagattctggacaaggaaatgcactgagctcattgcag
cagacacctgtaggatctgtacaacagaatctcgtgagcatttcccaaccaaccaatgtt
aacacaatgtcaacacaaagtggggtgagtatgatgcagccaaatatgccccttcagtcg
aattccaatatgattcaacaccagcatctaaaacagcagcagcagcatgaacaacatatg
ctacaaacacaacagcttaaacgaatgcagcatcgccagaatttaatgcagaatcaacag
atgctgcagcagcagcagcaattacaccagcaagccaagcagcagttgcctgcacagatg
cagacacaccaaattccacagccgcaacagatgaatgatgtaaatgagatgagacagggg
attggaattaagccagcagtcttccaacaacatctcccaacagctcaacgcacagctttc
ccacgtcaacacatgaaacctgcaccttcatttcctatttcttcacctcaactacctcag
catgcttcccctcaattacaacattcatctcctcagattgaccagcaaaatctaccgtct
tctgtaaccaaaactggaacacctctgcaatctgcgaactcgccttttgttgtcccatct
ccttcaactcctttagctccatctcctatgccaggagattctgacaaaccagtttctggt
atttcctcactcttaaatactggaaatattgtacaccaaccatctgttgcacaagcaccg
gctccatcccttgcaattggcactcctgggatatctgcatcacctttgcttgcagagttt
accagtcctgatggtgctcatggcggtgctttgacaactgtttctggcaagtcaaatgtt
acagagcaaccacttgagcgcttgattaaagcggtgaaatctctgtctcccaaagcactt
agtgcatctgtcggtgacattggctccgttgtaagtatgattgacagaattgctggttcg
gcacctggtaatggatctagagctgcagctggtgaggatttggtagcaatgacaaaatgt
cgccttcaggcaagaaattacatcacccaagatgggatgactggatcaaggaaaatgagg
cgccatacaagtgccatgcccttgaatgttgtatcatcagctggcagtgtaagtgacagt
tttaaacagtttactggtccagaaacttctgatttggaatcaactgcaacatcaagtgtc
aagaggcctagaattgaggccaatcatgcccttttggaagagataagggaaataaatcag
cgacttatagacacggtagttgatattagtgatgaagatgttgattcaactgcagtagct
gctactgctgaagggggtgaaggaaccattgtcaaatgctcatttagcgctgtggctctt
agtcaaaatttgaaatcacagtatgcttcagcgcaaatgtcaccaattcagcccctcaga
ttgcttgtgcctacaaattatccaagttgctcacctatactgttagacaggtttccagtt
gaagtcagtaaagagtacgaggatctgtcaataaaagctaaatccaggtttagcatctct
ctccgaagcctttcacaacccatgtcacttggagagatagcaaggacttgggatgtctgc
gcccgtgtggttatttcagagcatgcccagcagagcggcggtggcaccttcagctcaaaa
tatggttcttgggaaaactgcctgagcgcagcttga
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