Populus trichocarpa (black cottonwood): 18096927
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Entry
18096927 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18096927
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
18096927
Spliceosome [BR:
pop03041
]
Complex B
Other components
RES complex
18096927
Complex C
18096927
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Bud13
PTS_IIB
Motif
Other DBs
NCBI-GeneID:
18096927
NCBI-ProteinID:
XP_024453470
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Position
3:complement(11366394..11374832)
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AA seq
554 aa
AA seq
DB search
MASSTMGSKSLKEYLKKYGSDNQEEEKKVKKKKKKVKPNASGVLVVDEDPVWQKPVKLEE
EENDSADDENPQVDEDIEVKRMKRLELIRARRAYNAIAEDGSGWVILPPNHANSADPYPD
MSPLHKRKVRNDTPSPEHEGKPLHNGGDDADLSPPRQQQRQHHSPSPAPDTNLNSDLSPP
RNRRYRNDTPSPEPRLKPSREASDLSPPRRQQKHHHSPSPKPYTKSKHTSVLNSDLSPPR
RRRTDTESPKLKPLKEDTDLSPPRQQRRRHYTPSPKPEPDLSPPRKRKKDVGRSGLPDNS
HLSLQLSTQSGNSRASMAQDISPPRKNRKESSDPVSSKEPPKTGLITGRDMREEIKTKKE
ASLLFDKMDPSISGRGVEPVYRDKKTGERISKDDYLKSKQKVEEKPKEKKLEWGKGLAQK
REVETRLEELELEKDKPFARTRDDPELDKMLMERVRWGDPMAHLVKKKHSELDLADLGDS
EKMKESGFIIPQDIPSHSWIKRGLDAAPNRYGIRPGRHWDGVDRSNGYEKQLVKRVNEKQ
ATEREAYLWSVSDM
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcgactatgggatccaagtcattgaaagaatatttgaaaaaatatggaagt
gacaatcaagaagaagagaagaaagtgaaaaagaagaagaagaaagttaaaccgaatgcc
tctggtgttttagttgtggatgaagaccctgtttggcaaaagccagtgaagcttgaagag
gaggaaaatgattcagctgatgacgagaatcctcaagttgatgaagacatagaagttaaa
cgaatgaagaggctggagctaattagagctcgacgtgcttacaatgcaattgctgaggat
ggaagtggttgggttatattacctcctaaccatgccaattctgctgatccttaccctgat
atgtcccctcttcataaaaggaaggttcggaatgacacaccctcacctgagcatgaaggg
aagcctttgcataatggtggagatgatgcagatttgtctcctccacggcaacaacagaga
cagcaccatagtccatcacctgctcctgatacaaatttgaattcagatctgtcgccaccc
cgtaatagaaggtatcgaaatgatacaccatctcctgagccgcggttgaagccttcaaga
gaagctagtgatttgtcaccaccacgaaggcagcaaaaacaccatcattctccatcaccc
aagccctatacaaagtctaaacacaccagtgttctgaattctgatttgtcaccaccacga
agacggaggactgatactgaatcacctaaattgaagcctttgaaagaagatactgatttg
tctcctccaagacaacagcggcgacgacactatactccatcaccaaaacccgagccagat
ctttcacccccaaggaaaagaaagaaggatgttgggagatcaggattgcctgataattct
catttatcactacagctttcaactcagagtggtaattcacgtgcatccatggctcaagac
atttctccaccaaggaaaaacaggaaagaatcatctgatccagtttcttcaaaggaaccg
ccaaaaactggtctgatcactggtcgtgatatgcgggaagaaattaaaactaagaaggaa
gcgtcattgttgtttgacaagatggatccttctataagtggacggggtgttgaacctgta
taccgtgataagaaaacaggagagcgcatatcaaaggatgattacttgaaatcaaaacaa
aaagtagaggaaaaacccaaggaaaagaagttagagtggggaaagggcttggctcaaaag
cgggaagttgaaactaggctggaggagttagagcttgagaaggacaagccatttgcacgg
actagggatgatccggaacttgacaaaatgctgatggaaagagtaagatggggcgatcct
atggcacatttggtcaagaaaaagcattctgaactggatcttgcagacctaggggatagc
gagaagatgaaggaatcaggatttataattccccaggacatacctagtcacagctggata
aaacgaggattagatgctgctccaaatcgatatggtataagaccaggaagacattgggat
ggggtggatcgaagtaatggatatgagaaacaacttgtcaaacgggtgaatgagaaacaa
gctacagagagggaagcctatctttggtctgtgtctgatatgtaa
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