Populus trichocarpa (black cottonwood): 18097330
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Entry
18097330 CDS
T01077
Name
(RefSeq) protein STRUBBELIG-RECEPTOR FAMILY 8
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_1
LRR_8
LRRNT_2
LRR_4
LRR_6
Mid2
Adeno_E3_CR2
Lamp2_2nd
PRIMA1
Motif
Other DBs
NCBI-GeneID:
18097330
NCBI-ProteinID:
XP_052308458
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Position
4:complement(321781..327661)
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AA seq
715 aa
AA seq
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MTLKHFELFLFVSVIKVLIFGFPVLVQCTTDANDVQALQVMYTSLNSPSQLTTWKSNGGD
PCAESWKGITCEGSAVVSIQISGLGLDGTMGYLLANLMSLRTLDLSDNHLRDSFPYQLPP
NLTSLNLAKNNLSGNIPYSMSSMVSLSYLNISRNSLAQSIGDVFLNLSLLATMDLSFNSF
SGDLPSSFNSLSNLSTLNVQNNQLTGSLNVLTGLPLTTLNVANNNFSGWIPQELSSIPNF
IYDGNSFDNGPSPPPPPYTPPPPGKSHRNRTHPGSGAPVTPSSDGQPSQSDKGISVGAIV
GVALGSLVLVLIVLLALVFCIKKHKSKEIGPLATRGSRPADTDDIDRDMQESRVKNMAAV
TDLKPPPAEKLVVERLQGNSGSIKRMKSPITATSYSVASLQTATNSFSQEFLIGEGSLGR
VYRGEFPNGKMMAVKKIDNAALSLQEEDNFLEAVSNMSHLRHPNIVSLVGYCVEHGQRLL
VYEYIANGSVHDILHFADDGSKTLSWNARVRVALGTARALEYLHEVCLPSVVHRNLKSAN
ILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVV
MLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALAKMVDPILNGMYPAKSLSRFADII
ALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRSSDESGFAYRTPDHEAIDSSF
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgacattgaagcactttgagttatttttgtttgtgtctgtgattaaagtcttgatcttt
ggtttcccagttcttgttcaatgtactactgatgctaatgatgttcaagctctacaagtt
atgtacacttcgctgaatagtccttcacagctaaccacttggaaaagtaatggtggggat
ccatgtgcagagtcatggaaagggatcacttgtgaaggatcagctgttgtttccattcag
atttctgggttaggacttgacgggacaatgggatacttgcttgcaaacctcatgtcattg
agaacattagatctaagtgacaaccaccttcgtgattcattcccatatcagttaccaccg
aatcttacaagcttaaatctcgccaagaacaacttgagtgggaatattccttattcaatg
tctagcatggtttctcttagttatctaaacataagccgcaattcactcgcccaatcaatt
ggagatgttttccttaatctttctctcctcgcaaccatggatctctctttcaacagcttt
agtggagatcttcccagttcttttaattcgttgtccaatctttctacactcaatgttcag
aacaatcaactgactggctctcttaatgttcttactggtttgcctttgacaactctaaat
gttgcaaacaataactttagtggatggatacctcaagagcttagttcaatcccaaacttt
atatacgatggaaattcttttgacaatggtccttctccacctccgccaccatatacccca
ccacctcctggtaaatctcacagaaaccgtactcatccaggatctggtgcgcctgtcacc
ccttcttctgatggtcaaccatcacagtcagataagggaatttcagtgggagctattgta
ggtgtagccctgggttctcttgttctggttctcattgtactacttgctcttgtcttttgc
attaagaagcacaaaagcaaggaaattggtcctctagctacccggggaagtcgtcctgct
gatacagatgacattgatagagatatgcaagagtcaagggtgaaaaacatggctgctgtt
acggatctgaagcccccacctgcagagaaattggtggttgagagattacaagggaattct
ggatccataaaaagaatgaagtcgcccatcactgccacttcatatagtgttgcttctcta
caaacagcaacaaatagctttagtcaagagtttctaattggtgaaggttctcttggtcgt
gtttacagaggagagtttcctaatggaaagatgatggctgttaagaagatcgacaatgca
gcattgtcattacaggaggaagacaactttcttgaagctgtttcaaatatgtcacacttg
aggcacccaaacattgtttccctagtaggatactgtgtggagcatgggcagcgactcttg
gtttatgaatatatagcaaatgggagtgtgcatgatatactgcactttgctgatgatggc
agcaagacattatcttggaatgcacgtgttagagtagcacttggcactgcccgtgcttta
gagtacttgcatgaagtctgcttgccttctgttgtacatagaaacttgaagtcggcaaat
attttacttgatgaagaacttaatccccacttgtcagactgtggtttggctgctctgaca
ccaaacacagagagacaggtttcaacacagatggttggctcatttggttatagtgctcct
gaatttgctctgtcaggaatatacactgtaaaaagcgatgtctacagctttggggtggta
atgctagagctattgactggtcggaagccacttgacagttcgagggtgagatcagagcag
tcacttgttagatgggctactcctcaactgcatgatattgatgccttggcaaaaatggtt
gatcctatcttaaatggcatgtatcctgcaaagtctctttcacgtttcgctgacatcatt
gccctctgtgtccagccggaacctgagtttcgccctcccatgtctgaagttgtgcaagca
ttagtacgactagtgcaaagggccagtgtggtcaagaggcgatccagtgacgagtcagga
tttgcatatagaacccccgatcatgaggcaatagattcatcattttga
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