Populus trichocarpa (black cottonwood): 18098893
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Entry
18098893 CDS
T01077
Name
(RefSeq) probable nucleolar protein 5-1
KO
K14565
nucleolar protein 58
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
18098893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
18098893
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
18098893
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GFIT
Motif
Pfam:
Nop
NOP5NT
Motif
Other DBs
NCBI-GeneID:
18098893
NCBI-ProteinID:
XP_006382714
UniProt:
U5GGE3
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Position
5:complement(2890529..2894878)
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AA seq
562 aa
AA seq
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MLLLFETPGGFALFKVLDEGKLSKVEDLGKEFSSPDSARKVVKLKAFSKFENTAEALEAA
TKIIESSTSKGLRKFLRANCDGETLGVADSKLGNAIKDKLKIECVHNNGVMELMRGVRSQ
LTELISGLATQDLAPMSLGLSHSLSRYKLKFSPDKVDTMIIQAIGLLDDLDKELNTYAMR
VREWYGWHFPELAKIIQDNILYAKAVKLMGCRDNAAKLDFSEILPEEVEAELKEAAMISM
GSDVSDVDLMNIKELCDQVLSLAEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLIAHG
GSLLNLAKQPGSTIQILGAEKALFRALKTKHATPKYGLLYHASLVGQAPPKLKGKISRSL
AAKSALAIRYDALGDAQDDSMGLENRLKLEARLRNLEGKELGRSAGSAKGKPKIEAYDKD
RKKGAGGLITPAKTYNPSADAVLGQTPDSTARKFEVEPAKEAPASGEEKKEKKKKKRAEE
ETTVPGDRNGTAEQDGEGEAKKEKKKKKKHQAENDGVQNEAENVEEGGKKKKKQKHSEAE
QDEESEMPSKKKEKKKKKKSGD
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgctattcgagacgccagggggctttgccctttttaaagtcttggatgaagga
aagctatctaaagttgaggatttggggaaggagttttcaagcccagactcggcaagaaag
gtggtgaagttgaaagctttttcaaagtttgagaacacagctgaggctttggaagctgct
accaaaataattgaaagctcaaccagcaaaggtcttcggaaattcttgcgtgctaactgt
gatggtgaaacattaggtgtagctgattcaaagcttggaaatgcaataaaggataaactg
aaaatagaatgtgttcacaacaatggtgtcatggaattgatgaggggtgttaggagtcag
ttgacagaactcatatctggtttagctactcaagatttggcaccaatgagcttgggtttg
tctcacagtctatccagatacaaactgaagttcagccctgataaggttgacacaatgatc
attcaagccattggtttactcgacgatcttgataaggagctgaacacatatgcaatgagg
gttcgagaatggtatggttggcattttcctgagcttgccaagatcatacaggacaacatc
ctttatgccaaagcagtgaaactaatgggttgccgtgataatgctgcaaagcttgatttc
tctgagatactgccagaagaagttgaagcagaactgaaggaggcagctatgatatcaatg
ggaagtgatgttagtgatgttgacttgatgaatatcaaagaactatgtgaccaggtttta
tctttagctgaatatagagctcaactgtatgattatttaaaaagcaggatgaataccatt
gcaccaaacttgactgctcttgttggagaacttgttggagctcggcttattgcccacggg
ggtagcttgttgaatcttgcaaagcagcctggtagcactatacagattcttggggcagaa
aaggctctcttcagagctctgaaaacaaagcatgctactccaaaatatgggcttctttac
catgcatccttggttggtcaggctccccctaagctgaagggtaaaatttccaggtcacta
gctgcaaaatctgcacttgcaatccgatatgatgctcttggagatgcccaagatgactct
atgggactggagaaccggctaaagcttgaagcacgattaaggaatctcgaaggaaaagaa
ttgggtcgctctgctgggtctgctaagggcaaaccaaagatagaagcttatgacaaggat
aggaagaagggagctggaggattgataactcctgccaagacatataatccttctgcagat
gctgttcttggccaaacaccagattcaactgctaggaagttcgaagtagaaccagcaaag
gaggctccagctagtggagaagagaaaaaagagaagaaaaagaagaagagagctgaagaa
gaaacaactgtgccaggtgacagaaatggaactgccgaacaggatggcgaaggggaagct
aagaaagaaaagaagaaaaagaagaaacatcaagctgagaatgatggtgttcaaaacgaa
gctgaaaatgttgaggagggaggcaagaagaaaaagaagcagaaacattccgaagccgaa
caggatgaggaatctgaaatgccaagcaagaaaaaagagaaaaagaagaagaagaagagt
ggggattga
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