Populus trichocarpa (black cottonwood): 18099258
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Entry
18099258 CDS
T01077
Name
(RefSeq) auxilin-like protein 1 isoform X1
Organism
pop
Populus trichocarpa (black cottonwood)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaJ
Motif
Other DBs
NCBI-GeneID:
18099258
NCBI-ProteinID:
XP_052308821
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Position
5:complement(8941447..8948804)
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AA seq
1462 aa
AA seq
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MENLTHSQHPNMLSKKPFTNPSKTVYDDVFSAPPRFGAAPTLSPRVEDYGEIFGAFHAPR
GASSSIPVLDLPLVDNEAAEDVFFDVRSCSGFDYNEVFGGFNASDFDVSFEELMMEHSNG
RDFSSDEAWTPEDPEYLSEESDNSAKNQCLSNGDSHESIDGSMEFNISYHKASQSSNKDM
TNGITHVTKLFDVPGYAFMVDKSMSLPKTDNEYPPLHVSDDGHLNIDFMGEMMGEKKLRK
TMSHPANGSADGLVFGNEVRPHKEYVRNVSLPNETFVTISDVNLKTHPSHLPPPSRPPPA
FDFKKRDFSKSTPNCQGVASSGSAGDSSPPYFDVEVDASSSAAASAAAIEEAMEKAQAKL
KSAKELMERKRDGFQSRTKSGSKNDRKDREGRVSKNDDVSGSKKYEEGTCERENKIEFSV
MEERKKIRIPDSVEGKRHLNAAEKSSDEKHGRESLSSQGSDRIDEAGEWKEATQFFELVR
TNVPRKVTESENNDNILLQNTNIHERGQKVKKAATEAMQQQQENGKKVQAFTADHELEEY
AKNPKVSKPARDHGGSNGRSEAAKVSHGEKGLAMKVQVAQEVFRVEDEERFRMNLQSIGT
EKRQTRANGSQKHENVVEVPREQSKIEVRQTAEDKEKGPLPKEAIRSVENEKQLIRKKDG
GERRGRSTFEQEENEKMLKAPLEQMENERRLKEALKQGEKEKRINEACVREETEKKQREA
YEKEEKEKRLRAALEWEENERKLKEAFVKEENERRLKEICEEYERRLGEATDREENERRQ
REVREREENEKRLKEALEKEENEGRLREFCQSEENEKRPKEALEHENKKKQKEANEREGT
EKKSKEVFENEGIEETLEQEANEKRLEETNELVESGKLREALEGEASELGTCEPEEIGDA
SQEIRNLGNIEVTLKDVSENDELGVLNEMGGNCRVAKQACETDENRNLGSTRLVGKHEGK
NGKQEVTGENAHEEISKVPPGLKIGNKEATVETVNVQVDGQTKVSGVDQGNLEHEKNQSI
VEDDAAASVYGDERMRKAGEAGNGTGQMNIEKTKKAFQIESDTANQGKEFDQDRGERRKN
MPQAVVMNQEDKKDNFMSTGAVKKSVVTGRKIEAAQPADLEAKGSTLGSTQQFNVSERKM
KNLNKTLSPEEKEAERMRREKELEMERLRKMEEEREREREREKDRMAVDRAALEARERVH
TEARDRAERAAVERAITEARERLEKACVEAREKSLADNKTYLEARLRERAAVERATAEVR
ERAFGKVMSERTAFETRERVERSVSDKFSASSRNGGMGPSSSSSVYNGSYYMERSEGVEG
ESPQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVKRWSSGKE
GNLRALLSTLQYILGPDSGWQPIPLTEVITSAAVKKVYRKATLCVHPDKLQQRGASLQQK
YICEKVFDLLKEAWNKFNSEER
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacacattctcaacacccaaacatgctctccaagaagcccttcaccaac
cccagcaaaactgtctacgacgacgtattttctgccccacctcgttttggagcggcccca
acattgtctcctcgagtggaagactacggcgagatattcggcgcgtttcacgcgccacgt
ggagcttcctcctcgattccagtgcttgatctcccattggtagataatgaagcagctgaa
gatgttttctttgatgttagaagttgttctggatttgattataatgaggtttttggtggg
tttaatgcctctgattttgatgtttccttcgaagagttgatgatggagcattctaacggc
cgtgatttttcctctgatgaagcttggacaccggaagatcctgaatatctatcagaagag
tcagataattctgcaaagaaccaatgcttgtcgaatggtgactctcatgagtccattgat
gggagtatggaatttaacatatcatatcataaagctagtcaaagcagcaataaagatatg
acaaatgggatcacacatgtgactaagctatttgatgttcctggatatgcttttatggtt
gataaatccatgtctttgccaaagacagataatgagtacccacctctgcatgtgagtgat
gatggccatctcaatattgattttatgggggaaatgatgggggaaaagaagcttaggaag
accatgtcacatccggctaatggcagtgctgatgggctagtttttggaaatgaagttaga
cctcataaggaatatgtcagaaatgtctctcttcctaacgagacatttgttactatttct
gatgtcaaccttaaaactcacccctctcatttgccaccaccctctagaccacctcctgca
tttgatttcaaaaagagagattttagtaaatcaactccaaactgtcaaggtgttgcttcc
tcagggagtgctggtgatagttctccaccttactttgatgtagaggtagatgcaagttcc
tctgctgcagcctctgccgctgctatagaagaagctatggagaaagctcaagccaagctt
aaaagtgcaaaagaattgatggagaggaagagggatggctttcaaagccgtacaaaatca
ggttcaaagaatgataggaaggatagagaaggtagggtgagtaagaatgatgatgtgtct
ggtagtaaaaaatatgaagagggcacttgtgaaagagaaaataaaattgagttttctgtc
atggaggaaaggaaaaagattagaattccagattcagtggaagggaaaaggcatctaaat
gcagcagaaaaatcttctgatgagaagcatggaagggaatccttgtcatctcaaggatct
gatagaattgatgaagctggagagtggaaagaagctactcaattttttgaactggtaaga
acaaatgtgcccagaaaagtcactgagtcggaaaataatgataacattttgctgcagaac
acaaacattcatgaacgagggcagaaggtgaaaaaggcagccacggaagcaatgcagcag
cagcaagaaaatgggaagaaagtacaagcatttacagcagatcatgaactagaggaatat
gcaaagaaccctaaagtatcaaaaccagctcgtgaccatgggggaagcaatgggagatca
gaagctgctaaagtgtcacatggagagaaagggcttgcgatgaaggtacaagtggctcaa
gaggttttcagagtggaggatgaggagagatttagaatgaacttgcagtctataggaact
gaaaagagacaaactagagctaatgggtcacaaaaacatgagaacgtggtagaggttcca
cgagaacaaagtaaaattgaagttaggcagactgcagaggacaaggagaaagggcctttg
ccaaaagaggctattagaagtgtggagaatgagaaacaactcattcgtaaaaaggatggt
ggtgaaaggagaggaaggagcacttttgagcaggaagaaaatgaaaagatgctcaaagca
cctcttgaacaaatggaaaatgagagaaggctgaaggaggcactgaagcagggagaaaag
gagaagaggataaacgaggcttgcgtgagggaagaaactgagaagaagcagagagaggct
tatgaaaaagaagaaaaggagaagagattaagagcagctcttgaatgggaagaaaatgag
aggaaactcaaagaagcctttgtgaaggaggagaatgagaggagactgaaagagatttgt
gaggagtatgagaggagactaggagaggctactgatagggaggagaatgaaaggagacaa
agagaggttcgtgaaagagaagaaaatgagaagagactcaaagaagctcttgagaaggaa
gagaatgaggggaggctgagagagttttgccaaagtgaagagaatgagaaaagaccaaaa
gaagctcttgagcatgaaaataagaaaaaacagaaagaggctaatgaaagagaaggaact
gagaagaaatctaaagaggtttttgaaaatgaagggattgaagagacactagaacaagaa
gcaaatgaaaagcgactagaagagacaaatgagcttgttgaaagtggcaagttaagagag
gctctggagggagaagcaagtgaactaggaacatgtgagccagaagaaattggggatgca
tcccaagagattcgcaacttgggaaacattgaggtgacgcttaaggatgtctctgagaat
gatgagctaggggtgctaaatgagatgggtgggaactgcagggtagcgaagcaggcatgt
gagacagatgaaaataggaaccttgggtcaactagattagttggaaaacatgaggggaag
aacgggaaacaagaagtgactggggagaatgctcatgaagaaattagcaaggtacctcca
ggtctgaaaattggcaacaaggaagcaacagttgaaactgtgaatgtgcaggttgatgga
caaacaaaagtgtctggtgtggatcaaggcaacttagaacatgaaaagaatcaatctata
gtggaagatgatgcagcagcttcggtttatggtgatgaaaggatgagaaaagcaggggaa
gctggaaatggaactggacaaatgaacatagagaaaactaagaaagccttccaaatagaa
tctgatactgcaaatcaaggcaaggaatttgatcaggataggggtgagagaagaaagaat
atgcctcaggcagttgttatgaatcaggaagacaaaaaggacaatttcatgtcaaccggg
gcagtgaaaaagtcggttgtgacgggaaggaaaatagaagctgctcagccagctgattta
gaagcaaagggaagcaccctgggatcaactcagcagtttaatgtgagtgaaaggaaaatg
aagaatctcaacaagaccctttcacctgaagaaaaagaagctgaaaggatgagaagagaa
aaagagttggaaatggaacgtcttagaaagatggaagaagagagggagagggagagggaa
agagaaaaggatagaatggctgttgacagagcagcgcttgaagctcgtgaaagggtacat
actgaagcccgtgatagggcagaacgggctgctgtggaaagagcaataactgaggcccgt
gaaaggctagagaaggcctgtgtggaggctagggagaagtcattggctgataataaaaca
tatttagaggccaggctcagggaacgtgctgcagtagagagagctactgcagaggtccga
gagcgtgctttcggaaaagtaatgtctgaaaggactgcttttgagacaagagaacgagta
gaaagatctgtctcagataaattctctgcttcttccaggaatggtggaatgggacctagc
tcttcatcctctgtatataatggttcctactatatggagagatctgaaggggtggaaggt
gagtcacctcagaggtgtaaagcaaggttagagagacataggcgaacagctgaacgtgcg
gcaaaagctctagcagagaaaaatatgcgagatcttcttgctcagagggaacaagcagag
agaaatagattagcagaaactctggatgctgatgtcaagagatggtcaagcgggaaagaa
ggaaacttgcgtgcattgctttcaactttgcaatatatccttggacctgatagtggctgg
cagccaattccgttgactgaagttataacttcagcagctgtaaagaaagtttacaggaaa
gccactctttgtgttcatcctgacaaattacaacaacggggtgcaagtcttcagcagaag
tacatatgcgagaaggtctttgatcttctgaaggaagcttggaacaagttcaactcagaa
gagcggtag
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