Populus trichocarpa (black cottonwood): 18099613
Help
Entry
18099613 CDS
T01077
Name
(RefSeq) transcriptional corepressor SEUSS
Organism
pop
Populus trichocarpa (black cottonwood)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM_bind
Motif
Other DBs
NCBI-GeneID:
18099613
NCBI-ProteinID:
XP_024456170
LinkDB
All DBs
Position
5:complement(19435538..19443532)
Genome browser
AA seq
932 aa
AA seq
DB search
MVPSGPPTPIGGAQSVSPSLLRSNSGMLGAQGGPLSSQTAFPSLMSPRTQFNNMSMLGNV
PSLLNQSFGNGGPNPGLPGPGSSQRGNIDTGAESDPLSNVGNGMGFNAPPPSFVPSNMVN
PGPSGQVQGQQFSNPSGNQLLPDQQQSQQLEAQSFQHGQQSMQQFSGSHNAQQVQQQHQF
QSIRGGLAGVGPVKMEPHVTNDQHGAQQPQPLRNLGPVKLEPQQIQTMRNLSTVKLEPQH
SDQSLFLQQQQHQQQQQQQQHQQQQQQQHQQQQHQQQQQQQHQQQFLHMSRQSSQQAVVQ
LNLLHQQRILQMHQQQQQQQQQQLLKAMPQQRPQLPQQFQQQNLPLRSPVKSVYEPGMCA
RRLTNYMHQQQRRPEDNNIDFWRKFVSEFFAPHAKKKWCVSMYGSGRQTAGVFPQDVWHC
EICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYQNSSGQIVLDYAKAIQE
SVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAA
TQTASSNLSVPELQNNCTMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKD
LIDYSRETGTGPMESLAKFPRRTGSSSGFHSQAPQPEGQQQQQQQLQTIPKNSNSDRSSA
QVPMQITASNGMASVNNSLTTASTTTSASTIVGLLHQNSMNSRHQNSMNNASSPYGGNSV
QIPSPGSSGTIPQAQPNPSPFQSPTPSSSNNPPQTSHSALTTSNHISSTNSPANIPLQQP
ALSGEADHGDSQSSVQKILHDIMLSNQLNGNGGMVGVGSLVNDVKNVNGILSTGNNTVLN
GGNGLVGNGTVNSSGIGGAGYGTMGGLVQSTVVNGIRAAMGNNSIMNGRMGMPSMVRDQS
MNHQHDLGNQLPSGLGAVNGFSNLQFDWKPSP
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggtgccctcggggccgcctactccaattgggggtgcccagtctgtttctccttcactt
ttgagatcaaattcggggatgttgggagctcaaggtggtcctttgagttcccaaacagca
ttcccttctctaatgtccccccgtactcagtttaataacatgagcatgcttggaaatgtg
ccctccctcctgaaccagtcttttgggaacggaggtccaaatcctggacttcctgggcct
gggagcagtcagcgtggaaatattgataccggggcagagtctgatccactttcaaatgtt
ggtaatggaatgggtttcaatgctcctccaccgtcatttgtaccgtcaaatatggttaat
cctggaccttcaggtcaagttcagggacaacagttttcaaatccttccggcaaccagttg
ttgcccgatcaacaacagtcccaacaacttgaagcacaaagtttccagcatggtcagcaa
tcaatgcaacagttctctggctctcacaacgcccagcaggtgcagcagcaacatcaattt
caatcaatacgaggagggttagctggtgttggacctgttaagatggagccacatgtgaca
aatgatcaacatggagcacagcagccgcagccactgagaaatctgggtccagtcaagttg
gagccacagcaaattcagacgatgcgaaatttgtcaacggtaaagttggaaccgcaacat
tcagatcaatctttgtttttacaacagcagcagcatcagcagcagcagcagcagcagcag
catcagcagcagcagcagcagcagcatcagcagcagcagcatcagcagcaacagcagcag
cagcatcagcagcagttccttcacatgtcaaggcagtcatctcagcaggctgttgtacaa
ctaaatcttttgcatcagcaaaggattctgcaaatgcatcagcaacagcaacagcaacag
caacagcaacttttgaaggcaatgcctcagcaaaggcctcaattaccacaacaatttcaa
caacagaacttacctttgagatctccagtaaaatcagtatatgaacctgggatgtgtgcc
cgtcgtctcacaaattacatgcatcaacagcagcgcagacctgaagacaataacattgat
ttctggaggaaatttgtttctgagttctttgctccccatgcaaaaaagaagtggtgtgtt
tctatgtatggaagtggccggcaaacagctggtgttttccctcaggatgtatggcattgt
gagatttgcaatcgcaagccaggccggggttttgaggcaactgttgaggttcttcccagg
cttttcaaaatcaaatatgaaagtggtaccttggaagaacttctttatgttgatatgcca
cgtgaatatcaaaactcatccggtcaaattgttctggattatgcgaaagcaatacaggaa
agtgtttttgagcaacttcgcgttgttcgtgatggtcaactacggatagtcttctctcca
gatttgaagatatgctcatgggagttttgtgctcgacggcatgaagagcttatacctcga
agattgttgataccacaggtaagtcagcttggtgctgcagctcaaaagtatcaggctgcc
actcaaactgcatcgtccaatttatctgtcccagagttgcaaaataattgtaccatgttt
gttgcatcagctcgacaactggcaaaagccttggaagtgccattagtaaacgatctagga
tatactaagagatatgtacggtgccttcagatatcagaagtggtaaatagtatgaaagac
ttgattgattatagccgagaaacaggaactggaccaatggagagtttggccaagttccct
cggaggacaggttcttcatctgggttccatagtcaagctccacagcctgagggacagcag
cagcaacagcagcaactgcaaacaatacccaagaactcaaatagtgatcgaagttcagcc
caagtcccaatgcaaatcactgctagcaatggtatggctagtgtaaataactcactcacc
acagcatctacaaccacgtctgccagcactattgtggggcttctccaccaaaattcaatg
aattcaagacaccaaaattctatgaataatgcaagcagtccctatggaggaaactctgtt
cagattccatctcctggttcctctggtacgattccacaggcacaacctaatccttctcct
ttccagtcaccaacaccctcatcatcaaataatcctccacaaacatctcatagtgccttg
acaacttccaatcatattagttccacaaattcaccagcaaacattcccttgcaacagcca
gctctttctggtgaggctgaccatggtgattctcaaagctctgtccagaaaatcttacat
gacatcatgttgtccaaccaacttaatggaaatggtggaatggttggggttggttctttg
gtgaatgacgtgaaaaatgttaatgggattttgtcaacaggcaacaatacggttctcaat
ggaggaaatggcctggtgggaaatgggacagtcaatagttctggaatagggggtgctgga
tatggcaccatgggtggacttgtgcagtctacagtggtcaatggaatcagagctgcaatg
ggtaataactctataatgaatggtcggatgggtatgccatcgatggtacgagaccagagc
atgaatcatcaacatgatttggggaaccagctgcctagtgggctaggagcagttaatggg
tttagtaatcttcagtttgattggaaaccatccccttga
DBGET
integrated database retrieval system
