Populus trichocarpa (black cottonwood): 18099805
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Entry
18099805 CDS
T01077
Name
(RefSeq) trans-cinnamate:CoA ligase, peroxisomal
KO
K23618
acyl-activating enzyme 11/12 [EC:
6.2.1.2
6.2.1.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pop01004
]
18099805
Enzymes [BR:
pop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.2 medium-chain acyl-CoA ligase
18099805
Lipid biosynthesis proteins [BR:
pop01004
]
Acyl-CoA synthetase
Short/medium chain acyl-CoA synthetase
18099805
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Gene cluster
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
18099805
NCBI-ProteinID:
XP_006380971
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All DBs
Position
6:2315410..2317540
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AA seq
584 aa
AA seq
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MDQLPKCDANYVPLTPINFLSRAAKVYGNRLSVVYEGIHFTWQQTYERCLRLADSLRYFN
ISKNDVVSVLAPNIPALYEMHFAVPMAGGVINAINTRLNPSHVATILRHSEAKVFFVDYQ
FVQLARQALEILMASESNSSKLVLPLVVLIDDIESPTGAIFGEWEYEQLVRKGNPGYIPY
EVQDEWDPIALNYTSGTTSEPKGVVYSHRSVFLGSLGEIIAWEMASEPVYMWSLPMFHAN
GWTLAWGIAARGGTNVCLRNTTAKDMYRNIAQYRVTHMCCAPIVFNILLEAKPEERREIT
SPVQILAGGAPPPASLLEKMKPLGFHVTHTYGLTEVGPALVCEWQAKWNNLPSQDQSKIM
ARQGINTVALAHMDVKDLNTMIGVPWDGKTMGEIVLKGSTVMKGYFKDPKATAKAFKNGW
FATGDIGVIHPDGYLEIKDRSKDVIISGGENISSVELESVLYSHPRVLEAAVVAMPHPVW
GESPCAFLAIRKNSDGKSNDLKEADIIAYCKEKLPSYMIPKKVEFIPELPKNSTGKIQKF
KLRDLARNFVVSETFPSKKSAQVNHNTELQGRQAQPARVASSRL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcttccaaagtgtgatgcaaattatgttcctctcactcccataaatttcttg
agtagagctgccaaagtttatggcaatcgcctctcagttgtgtacgaaggaatccatttc
acatggcagcaaacatacgagcgttgccttcgccttgccgattctctccgttactttaat
atttctaaaaacgatgttgtttcggtgttggctcccaacattccagctctgtatgagatg
cacttcgcagtgcccatggcagggggagtcatcaacgccatcaacaccagactaaatcca
agccacgtagccaccattctacgccactcagaagcaaaggtcttctttgtcgactaccaa
tttgtgcagctggcacgtcaggccctcgaaattctgatggcaagtgaatctaattcatcc
aaattagttctccctttagtcgttctcattgatgacatcgagtcaccgactggtgctatt
ttcggtgaatgggagtatgaacaacttgtccgcaagggcaatccagggtacatcccttat
gaggtccaagatgaatgggatcccatagccttgaattatacttctggaacaacatcagaa
ccaaagggggttgtctatagccacagaagtgtcttccttggctcccttggcgaaattatt
gcctgggaaatggcaagtgaacctgtgtatatgtggtctcttcctatgttccacgctaat
ggctggaccttagcttggggcattgcggcacggggtggaacaaacgtttgcttacgcaat
accactgctaaagacatgtataggaacatcgctcagtacagggtaactcacatgtgctgt
gcaccgattgttttcaacatcctccttgaggccaaaccagaggagcgtagggaaatcact
tctcctgtccaaatacttgccggtggggcaccaccaccggcctccctacttgaaaagatg
aagccattaggattccatgtcactcatacttatggcctcacggaggttggaccagccctt
gtgtgtgagtggcaagccaagtggaacaatcttccaagccaagatcagtcaaaaatcatg
gctagacaagggattaacacagtagctctggctcatatggatgtcaaagatttgaataca
atgattggcgtgccttgggatggtaaaacaatgggggagattgttctgaagggaagcact
gtcatgaaagggtatttcaaggacccaaaggccaccgcgaaagcattcaagaatggatgg
tttgctacaggcgatattggggtaatacatccggacggatacttggaaatcaaggacaga
tcaaaagatgtgattatatctggtggtgaaaacatcagcagtgtagaattagagtcggtt
ctttacagccatccaagagtcctagaggcagctgtggtggccatgccacacccagtttgg
ggagaaagtccttgtgcttttcttgccattagaaagaactcagatggaaaatctaatgat
ctcaaagaagctgatattattgcttattgcaaggaaaagcttcccagttatatgattcca
aagaaagtggagttcatccctgagttacccaagaattcaacaggaaaaattcagaaattc
aagttaagggatttggcacggaattttgtggtctcagagaccttccctagcaagaagagt
gcccaagtcaatcacaatacagaactccaaggacgtcaggctcagccagctcgtgttgct
tcgtctcgtctttga
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