KEGG   Populus trichocarpa (black cottonwood): 18100124
Entry
18100124          CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC18100124
  KO
K12826  splicing factor 3A subunit 2
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18100124
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pop03041]
    18100124
Spliceosome [BR:pop03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    18100124
 Complex B
    18100124
 Complex C
   U2 SnRNP specific factors
    18100124
SSDB
Motif
Pfam: SF3A2 zf-met CactinC_cactus GyrI-like
Other DBs
NCBI-GeneID: 18100124
NCBI-ProteinID: XP_006381374
UniProt: U5GA38
LinkDB
Position
6:complement(9621585..9625396)
AA seq 331 aa
MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPALPQPNKRKVNIRKTVKIGRPGYRVTKQ
FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSYEQRIEANDKRFQYLLFAAEPYEIISFK
VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKLKPPEANKPQSVAAANGTLPSQPPPPPPL
QGLAAGSRPPPPPLPASLPPPPPMGNGPRPMPPGGAPPAPPPPPGGSGAMANFTPGNQVG
RPPMLPPQGFPGQQMQGQVMRPPPPPPNMGQ
NT seq 996 nt   +upstreamnt  +downstreamnt
atggatagagaatggggttctaagccaggcagcggaggcgccgcctccgcccagaacgag
gcaatcgaccgccgtgagcgtctcagacgtctcgccctggagacaatcgatctagcaaaa
gatccctatttcatgcgcaaccacctcggcagttatgagtgtaagctgtgtctgactttg
cacaacaatgaaggaaactacttggctcacacacaagggaagcgccatcagaccaatttg
gctaagagagctgctcgtgaggctaaagatgcgcctgcccttcctcagcctaacaagcgc
aaagttaacattcgcaagacagtcaaaattggcaggcctggttaccgggtgacaaagcaa
tttgatccagagacaaagcagaggtctcttctcttccagattgaatatcctgagatagag
gacaatacaaagcctaggcatcgatttatgtcatcttatgaacagagaattgaggccaat
gataagaggtttcaatatcttttatttgcagcggaaccttatgagatcatttctttcaag
gttcctagcacagaaattgacaagtctactcctaaattcttctcacattgggatccggac
tccaagatgttcacattgcagttatattttaaattgaagccaccagaggcgaacaaacct
caatctgttgctgcagccaatggcacactgccttctcaaccaccaccacccccgccactg
caaggactagctgcaggatcaagacccccgccaccaccactgcctgcatcattaccccct
cctcctcccatgggtaatggccctaggcctatgcctccaggtggagctccacctgccccg
cctccacctcctggtggcagtggtgcaatggcgaatttcacacctggcaatcaggtgggt
agacctccaatgctgcctccccaaggttttccagggcaacagatgcagggccaggttatg
cgtccacccccaccacctcccaacatgggacagtag

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