Populus trichocarpa (black cottonwood): 18100135
Help
Entry
18100135 CDS
T01077
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18100135
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
18100135
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
18100135
03036 Chromosome and associated proteins [BR:
pop03036
]
18100135
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
18100135
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
18100135
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
18100135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
DUF4449
Motif
Other DBs
NCBI-GeneID:
18100135
NCBI-ProteinID:
XP_024459971
LinkDB
All DBs
Position
6:complement(9720977..9725169)
Genome browser
AA seq
490 aa
AA seq
DB search
MLRKIMKGGHRKPSKSDDNDFGFGPPPNSGSGPANNVVVNHSSRAAPGPPSPRYGPTVIT
PPPMNTVEPLPFFRDVPVSERPNLFLRKLQLCCFHFDFTDTLKSMREKEIKRQTLLELVD
FIQSGSGKITENCQEEMIKMVSVNIFRCLPPHENTGQEPTDPEEEEPYLEPSWPHLQLVY
ELLLRYVVMSDTDTKVAKRYVDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRP
FIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALIPLHKPK
QISVYHHQLSYCIIQFVEKDYKLADTVIRGFLKYWPVTNCQKEVLFLGELEEVLEATQSA
EFQRCMVPLFRQIARCLTSSHFQVAERALFLWNNEHIVDLIAQNRTVVLPIIFEALEKNI
QSHWNQAVHGLSVNIRKMFLDMDTELFEVCQRQYAEKESRARDVEEQRELTWKRLADVAA
QRGGEDMITV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggaaaatcatgaaaggagggcatcggaagccctctaaatcagacgataatgat
ttcgggttcgggccaccaccgaactccgggtctggtcccgcaaacaatgtggtggttaac
cattcgtcccgggctgctcctggccctccaagcccacgctatgggcctacagtcattact
ccgccgccaatgaacacggtggagcctctccctttcttccgggatgtgccggtttctgaa
cgtccgaacctgttcttacggaaactccagctatgctgcttccattttgactttacagat
accttaaaatcgatgcgagagaaggaaatcaagaggcaaactttattggagcttgtggat
tttattcaatcgggttcgggaaagattactgagaattgtcaagaggaaatgataaaaatg
gtttcagtgaatatattccggtgcttgcctccgcatgaaaatacagggcaagaacccact
gatcctgaagaggaggagccttatttggaaccatcttggcctcatttgcagcttgtttat
gagcttcttttaagatatgttgtgatgtccgatacagacaccaaggttgccaagaggtat
gttgatcattcgtttgtgttgaagttgcttgatttgtttgattctgaggatccgcgagag
agggagtatttgaagactattcttcataggatttatggcaagtttatggtgcatcgtcct
tttattaggaaggctataaataatattttctatcggtttatctacgagactgagaggcac
agtgggattggggaactgttggagattctagggagtattataaatgggtttgcgctgcca
atgaaagaggaacataagttgttccttgtaagggcgcttataccattgcataaaccaaag
cagatatctgtgtaccaccaccagctgtcatattgcatcattcaatttgttgaaaaggat
tacaagctggctgatacggttattaggggtttcttgaagtattggccagtgactaattgt
caaaaggaagttctcttccttggagaacttgaagaagtgctggaggcaacacagtctgca
gagtttcagcgttgtatggtccctcttttcagacagattgcacgttgccttaccagctcc
cattttcaggttgctgaacgagctctttttttgtggaataatgagcacatagtggattta
attgcccagaatcgaactgtcgtattaccaattatatttgaggcgttggaaaagaatatc
cagagtcactggaaccaggcagttcatggactatctgttaatattcggaaaatgttctta
gacatggatacggagttatttgaagtgtgtcagaggcagtatgcagagaaagagtctagg
gccagagatgtggaagagcagcgagaattgacatggaagagactggctgatgtggcagca
cagagagggggggaggatatgatcactgtttaa
DBGET
integrated database retrieval system
