Populus trichocarpa (black cottonwood): 18101239
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Entry
18101239 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18101239 isoform X3
KO
K13091
RNA-binding protein 23/39
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
18101239
Spliceosome [BR:
pop03041
]
Common components
Common spliceosomal components
General mRNP proteins
18101239
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
18101239
NCBI-ProteinID:
XP_024461278
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Position
7:complement(762991..774249)
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AA seq
616 aa
AA seq
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MEFDEIEYLEKTVEEAEDRDDTRKKNSSSSKKRNGTERSYRKRDVDDEDIDNDEDRKAKK
LKAEDENGRDRHHRRDRDLDRDRSSRQKDRERERREKDKEKERERREKEKERERREKEKE
REKRERGGEEEREEREKDKEKEIERRERERERRERGGEEEREKDKEKEIERREKERERER
ERRERGGEEERERRERSRSRSRRYESDNREREREREIDTRESRRFKEKKEVVEPEADPER
DQRTVFVYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMA
ITLSGQLLLGQPVMVKPSEAEKNLVQPSASGGGTGGVTGPFGAVDRKLYVGNLHFNMTEM
QLRQLFEPFGIVELVQLPLDLETGQCKGFGFVQFTQLENAKAAQSALNGKLEIAGRTIKV
SSVTEHGGQQDSGVKSADFDDDDGGGLALNAQSRALLMQKLDRTGTATSIAGSLGVPLLN
GSAPNQQAISLPVNGQTNIGAAAFPALVLPSPAYESIGQPSECLLLKNMFDPATETEPDF
DLDIKEDVEEECSRYGQVKHIWVDKNSAGHVYLQFDSMEAAARAQRAMHMRWFARRSILA
IFMPTREYEARFQNGA
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgacgagattgagtatctggagaaaaccgtagaggaagcggaagatcgagac
gatacgaggaagaagaacagcagtagtagcaaaaagagaaatggaaccgagagaagttac
aggaagcgagacgtcgatgatgaagatatcgacaacgacgaggaccgaaaggcaaagaaa
ttgaaagctgaggacgagaatggtcgcgatcgccaccaccggagagaccgagatttagat
agagatagaagtagcagacagaaagatagagagagagagaggagagagaaagataaggag
aaggagagagagaggagagagaaggagaaggagagggagaggagagagaaggagaaggag
agggaaaagagagagagggggggagaggaggagagagaggagagagagaaagataaggag
aaggagatagagaggagagagagggagagggaaaggagagagagagggggagaggaggag
agagagaaagataaggagaaggagatagagaggagagagaaggagagggagagggagagg
gaaaggagagagagggggggagaggaggagagagagaggagagagcgcagcaggagcagg
tcgaggaggtatgaaagtgataatcgtgagagggagagggagagagagattgatacgaga
gaaagcaggagatttaaagaaaagaaagaagtggtggagcctgaagctgatccagaaagg
gaccaaagaactgtttttgtgtaccagatgcctttgaaggcgacagagagagatgtgtat
gaattcttctcgaaagcaggcaaggtcagggatgttcgattgataatggaccgaaattca
aggcggtcaaaaggagttgggtatgttgaattctatgatgcaatgtctgtgccaatggca
ataactctttcaggtcaactgcttcttggacaacctgtaatggttaagccttctgaggct
gaaaagaacctcgttcagcctagtgcttcaggcggtggcacaggtggtgttactggacca
tttggagcagttgacagaaaactgtatgttgggaatttgcattttaacatgacagaaatg
cagcttagacagctttttgaaccatttggtattgtggagcttgtgcaactgcctcttgac
cttgagacaggacaatgcaaaggtttcggatttgttcaatttactcaacttgaaaatgct
aaggctgcacaaagtgctttgaatggaaaactggagattgcgggtcgaactattaaggtt
tcatctgttacagaacatggcggacagcaagacagtggagtaaaatctgctgacttcgac
gatgatgatgggggtggattggctttgaatgctcaatcaagagcattgcttatgcagaag
ctggataggactggcactgccacaagtattgcaggctctcttggagtacctttgctaaat
ggatcagctccaaatcaacaagccattagcttgcctgtcaatgggcaaactaatattgga
gcagcagcatttccggcactagttttaccttcccctgcttatgaatctattgggcaaccc
agcgagtgtctattgctgaagaatatgtttgatccagccactgagacggaaccagatttt
gatttggatattaaagaggatgtagaagaagaatgttcaagatacggtcaggtgaaacat
atttgggtggacaagaatagtgctgggcacgtgtatctacagttcgacagcatggaagca
gcagcaagagctcagcgtgcaatgcatatgagatggtttgcgcgcaggtcaattttagca
attttcatgccaacccgtgaatatgaagcaagattccaaaatggagcttga
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