Populus trichocarpa (black cottonwood): 18101498
Help
Entry
18101498 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18101498 isoform X1
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pop01001
]
18101498
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
18101498
Enzymes [BR:
pop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
18101498
Protein kinases [BR:
pop01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
18101498
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
18101498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Motif
Other DBs
NCBI-GeneID:
18101498
NCBI-ProteinID:
XP_024463130
LinkDB
All DBs
Position
8:complement(7645890..7657863)
Genome browser
AA seq
1058 aa
AA seq
DB search
MASDSDASRRKHRGSSSDDEVEKSSKRQKHRHHHHRHHRHRSKKHGGDTKQGGEEIAPPT
LPPPVPVAHSNRADNDDVEEGEILEEEGFGGVDIKANELREEITDSQNLQGFDKKDNGFV
SNQLVVDKFDNDVSFQRDSKAELQDELVSKIDSEDLIKGSLGHKNHTDDKKRHGESRYPS
KGSKRKNNRDIDPTEGDDSKLKDWKKSPSSESSEDKHKRARSPSHDKYHDEIHARSRSMS
RDIVRERSRSRSVIEDEALLRRKRHHDRIENDSYDERMSRYSRNLRHNIGDSVRNVDREW
SVSYIKSFDGEEWHHNKDAPDGERSRERERERRREKEQERSREREVDRDRRREMENERSK
ESDWRREKEQDRELDGERRREKGQERSRDRVEEIDRKKRMETDMTKHKNMQRASNRDRDK
ERERENGRDRYRERDRARDHDSGKERDRERRNDRDRDREKSRVIKSNSEKFYNSNSNLLG
QGRDNLNRDEDDQDDFEERIALKLAEQEEDNLDRIKEESRKRRDAILEKYRNQQLQQLKE
SGSEDADKNKEPIEGSGQSAAADNVAPETLDGRTDGADVYVIETSFSVGKSPLQNGIQAS
KRTSGTTGLGEGSPKSERSDEKLCDDIFGETPVGVCKSGKGDEKYCDDIFGETPVGVRKT
GKGEGLPIVRSGLHDNWDDPVGYYSHRFGEVLDGRYEIVAAHGKGVFSTVVRARDLNAGI
DEPEEVAIKIIRNNETMRKAGDTEVSILKKLAGQDPENKRHCVRFLSSFKYRNHLCLVFE
SLHMNLREVLKKFGRDIGLKLTAVRAYAKQLFIALKHLRNCGVLHSDIKPDNMLVNEAKN
VLKLCDFGNAMFSGKNEITPYLVSRFYRAPEIILGLPYDHPMDMWSVGCCLYELYSGKVL
FPGSTNNDMLRLHMELKGPFPKKMLKKGAFVDQHFDNDLNFHATEEDPVTKKIMKKIIVN
IKAKDVGSIISGSPGEDPKMLANFKDLLEKIFVLDPEKRMTVYQALAHPFITVFRMAEVK
TGDMWSAVLFTGGSFSGMYWFYCKTTCQRRFFSSCNHF
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgactccgatgcctcacgtcgcaagcaccgaggatcttcctccgatgacgag
gtggagaagtcctcgaagcgccagaaacatcgtcaccatcatcaccgacatcaccgccat
cgtagcaagaagcacggaggggataccaagcaaggcggtgaagaaatcgctcctcctact
cttcctcctccggttcctgttgcgcatagtaatagagctgataacgatgacgtggaggaa
ggggaaattcttgaggaggaaggttttggtggtgtcgatatcaaggccaatgaattacgt
gaggaaataactgattctcaaaatctgcagggatttgacaagaaagacaatggtttcgtg
agtaatcaactagttgttgataagtttgacaatgatgtcagctttcaaagagattctaag
gctgagcttcaagatgagttagtttctaaaattgactcagaggatcttatcaaaggtagt
ttgggtcacaaaaaccatacagatgacaagaagaggcatggggaatctagatacccttca
aaaggaagtaagcgaaagaataaccgggatattgacccaactgagggtgatgatagcaaa
ttaaaggattggaagaagtcaccatcatctgaaagcagcgaggacaagcataagagggca
cgttcaccatcacatgataagtatcatgatgagattcatgctagaagtagatcaatgtca
cgagatatagttagggagagatctcgttcccgtagtgtaattgaagatgaggctcttttg
agaagaaaaagacaccatgacaggattgagaatgactcttatgatgaaagaatgtctaga
tacagcaggaatttgcggcacaacattggagattcagtgagaaatgtggatagggaatgg
agtgttagttacatcaagtcttttgatggagaagaatggcatcacaataaggatgcaccg
gacggagagaggagcagggagagggagagggaacggagaagagagaaggaacaagagaga
agcagggagagagaggttgacagggataggagaagggagatggaaaatgagaggagcaag
gaaagcgattggagaagggagaaggaacaagatagggagctagatggggaaaggaggagg
gagaaaggacaggagaggagtagggacagggtggaggagatagatagaaaaaaacggatg
gaaacagatatgaccaaacacaaaaatatgcaaagggctagcaacagagatagagataag
gagagagaaagggagaatggtagagataggtacagagaaagggatagagctagggaccat
gacagtggaaaagaacgggacagggagaggcgaaatgacagggatagggatagggagaaa
tctagggttattaagagcaattcagagaaattttataattccaacagtaatttgttagga
cagggaagagacaatctaaacagagatgaagatgaccaagatgattttgaagaaaggatt
gcactgaaattagctgaacaggaagaggataatcttgatagaataaaggaggagagtaga
aagcgaagggatgccattcttgaaaaatatagaaatcagcagttgcagcagctgaaagag
tctggatcagaagatgcagacaaaaacaaggagcctatagaaggttctggccaatcagca
gcagctgacaatgttgctccagaaactcttgatggtaggactgatggtgctgatgtttat
gttatcgagacatcattttctgtggggaaatcacctttacaaaatggaatacaagcttcc
aagaggacttcaggaactacagggcttggagagggttcgccaaagagtgagagatcagat
gaaaaattatgtgatgatatttttggagagactcctgttggagtttgtaaatcgggtaaa
ggagatgaaaaatattgtgatgatatttttggagagactcctgttggagttcgtaaaacg
ggtaaaggagagggtttgccaatcgtgaggagtggtcttcatgacaattgggatgatcct
gtaggatattatagccaccgatttggagaagtacttgatggtcgatatgagattgttgct
gctcatggaaaaggtgtcttttctacagtagttcgcgcaagggatctgaacgctggcatt
gatgaacctgaagaagtggctataaaaattatacgcaacaatgaaacaatgcgtaaggct
ggtgatacagaggtttcaatattgaagaaattagcaggtcaagatccagagaacaagcgt
cactgtgttcgttttctttcaagtttcaagtatagaaaccatctttgtttagtttttgaa
tctcttcatatgaacctgcgtgaggtcctaaaaaagtttggtcgagatattggccttaaa
ctaactgctgttagggcatatgcgaagcagctttttattgctctgaagcatctaaggaac
tgtggtgttcttcacagtgatataaagcctgataatatgcttgtaaatgaggcaaaaaat
gtgctgaagctttgtgatttcggtaatgcgatgttttctggtaaaaatgaaattacaccg
taccttgtaagccgattttatcgtgctcctgaaataattcttggtttgccgtatgatcat
ccgatggatatgtggtctgttggttgctgcttgtatgaactttattctggaaaagttctt
tttccaggttctacaaacaatgacatgctacgacttcacatggaattgaagggccctttc
ccaaagaagatgcttaagaagggtgcatttgttgaccagcattttgataatgatttgaat
tttcatgctacagaggaagatcctgttactaaaaagattatgaaaaagattattgtgaac
ataaaggcaaaggatgttgggtctattatttctggctctcctggtgaggatccaaagatg
ctagcaaactttaaagatcttctagaaaaaatctttgtgttggatcctgagaagaggatg
acagtttatcaagcactagctcacccattcatcacggtttttcgcatggctgaagtcaaa
actggtgatatgtggtcagcagtactctttacaggcggttcattcagtggaatgtactgg
ttctattgtaagacaacttgccaaaggcgttttttctcctcttgtaatcatttttaa
DBGET
integrated database retrieval system
