Populus trichocarpa (black cottonwood): 18101538
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Entry
18101538 CDS
T01077
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18101538
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
18101538
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GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
18101538
NCBI-ProteinID:
XP_006379802
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Position
8:9594818..9600694
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AA seq
609 aa
AA seq
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MAASSSVPFFGIREEDQNQMKQQHSSTPTSSSAQAPPPPKKKRNQPGTPNPDAEVIALSP
KTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVRRKVYLCPEPTCVHH
DPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLF
SRRDSFITHRAFCDALAQESARNPPPNLNTIGSHLYGSSNMTLGLSRVGTQISSLQDHSN
QSTDVLRFGGGVRTGQFDHLLPPSIGSSSFRPPQQMPSSAFFMQETSQNYHDENQSQQEL
LQNKPFHHGLMQFADIHNNTSNPPSAGNLFNLSFLSNSSTTNSNNANNSNSNLPTSGLLI
SDHFNNQNGVGGGSEGTNNFSNNVRGNQMTSGVPSLFSSSVQNDNMVSHMSATALLQKAA
QMGSTSSNNSASLLRSFGSSSSSGTKSDRALVGGNFGGMLSDNENNLHELMNSFAPGNPS
IFGSGHAQENPYGGYTANRTSLEQEKQHHGPNFGNINMDEAKLHQGLNASNIGGSDRLTR
DFLGVGPQIVRSMSGSSGFSQREKQQQQQLQHQHHGMDMGDSSLDLERHNTNISAAPTSQ
SFGGNGSFQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcttcatccgtgcctttctttggaattagggaagaggatcaaaaccagatg
aaacaacagcattcctcaaccccaacttcatcttcagcccaggctccgccgccaccaaag
aaaaagagaaaccaacctggaacaccaaatccagacgcagaggtgatagcactatctccc
aagaccctaatggcaacaaacaggttcatatgtgaggtatgcaacaaagggttccaaagg
gagcaaaacctacagctccacagaagaggacacaacctaccttggaagctaaagcagaag
actacaaaagaagtgaggaggaaggtttatctgtgtcccgagcccacatgcgtccaccat
gacccttctagagctcttggtgaccttactggaataaaaaaacactactccaggaaacac
ggtgagaagaaatggaagtgtgagaagtgctcaaaaagatacgctgttcaatctgattgg
aaagcccattctaagacttgtggcactagagaatacagatgtgactgtggtactctcttc
tcaagacgtgacagctttatcactcacagggcattctgtgacgcattggctcaagaaagt
gcaagaaaccctcctcccaacttgaacacaattgggagtcatttgtatggaagtagcaac
atgaccttaggcttatctcgagtaggtactcaaatttcttcattacaagaccacagtaac
cagtctactgacgtcttacgatttggtggtggtgtccggactggacaatttgatcatctt
ctccctccatcaattggatcatcttcatttcgacctccacagcaaatgccttcatctgcc
ttcttcatgcaagaaacaagccagaattatcatgatgaaaaccaatctcagcaagagttg
ttgcaaaataagccatttcatcatggactgatgcaatttgctgatattcacaacaacaca
agcaaccctccctctgctggcaatctattcaaccttagctttctttccaatagtagcacc
acaaacagtaacaacgcaaacaattccaacagcaacttaccaacttcaggattgctaata
tccgatcatttcaataaccaaaatggtgttggtggtgggagtgaagggactaataacttc
tcaaacaatgtaaggggtaatcaaatgacctctggtgttccttctctctttagttcttcg
gttcagaatgataacatggtctctcacatgtctgctactgcgctgcttcaaaaggctgct
caaatgggttccacttcaagcaacaatagtgcctcattgctaagaagttttggtagctct
tcttcaagtggaaccaaatcagatagggcgctagttggtgggaactttggtggcatgctc
agcgacaacgagaataatcttcatgaactaatgaactcatttgctcctgggaatccctcc
atttttggttctggacatgcacaagaaaacccctacggtggatatactgcaaataggact
agtctggagcaagaaaagcaacaccatggcccaaattttggcaatattaatatggatgaa
gcaaagttgcaccaaggtctcaatgcaagcaatatcggtggatctgatagactgacaaga
gactttcttggtgttggtcctcaaatagtgagaagcatgagtggatcatcagggttttca
caaagagaaaaacagcagcagcagcagctacaacatcagcatcatggcatggatatgggt
gactcctccttggatttagagaggcacaatactaatatttctgcggcgccgacaagccaa
tctttcggaggaaatgggagttttcagtga
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