Populus trichocarpa (black cottonwood): 18102624
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Entry
18102624 CDS
T01077
Name
(RefSeq) polygalacturonase At1g48100
Organism
pop
Populus trichocarpa (black cottonwood)
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
18102624
NCBI-ProteinID:
XP_006378559
UniProt:
U5G278
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Position
10:16162493..16165236
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AA seq
482 aa
AA seq
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MEIIRGILAICIAVSFLLYNSSNVEGRSRYHKPKNKSSKNPEPPVSPTPYNAPDPQNPTA
PSSPSNSPSIPSDPYPNDPGNTSSDYIFNVMDYGAVGDGSTDDTNAFRQAWKEACGVESG
VILAPSGYSFMITSTIFSGPCKPGIVFQVDGCLMPPDGPDSWPEKDSTQQWLVFYRLDGM
TLTGEGTIEGNGEKWWDLPCKPHRGPNGSTSKGPCVSPALIRFFMSSNLEVSGLKIQNSP
QFHMKFDGCEGVLIKKLSISSPKLSPNTDGIHIENTKAVGIYDSFISNGDDCISIGTGCS
NVDIDGLTCGPSHGISIGSLGVHNSQACVSNITVRNTIIKESDDGLRIKTWQGGTGCVSD
INFENIQMENVRNCIIIDQYYCLSKACQNETSAVYVTGVTYRNIKGTYDVRTPPIHFACS
DTVACTNILLSEVELLPEEGELVDDPFCWNAYGTEETVTIPPINCLREGEPEGLREISSY
GC
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggagatcattcgcggtattttagccatttgcattgcagtgtcctttctgctttataat
tccagcaatgtagaaggaaggtcccgttaccacaagccaaagaacaaaagctccaaaaat
ccagagccccctgtttctccaaccccttataatgccccagatcctcaaaaccccactgcc
ccttcatctccttctaattctccttcaatcccttcagacccttatccgaacgatcctgga
aacacaagttcagactacattttcaatgtcatggattatggggcagttggtgacggttcc
actgatgacactaatgcattcaggcaggcctggaaagaagcttgtggagtggaatctggt
gttattctggctccttcaggttattctttcatgatcacttcaactattttctcaggtcca
tgcaagccaggaattgtgtttcaggtggatgggtgcctaatgccgccggatggaccggat
tcctggccagagaaggatagcacgcagcaatggcttgtgttttatcgacttgacggtatg
actctcacaggagaaggaaccattgaaggaaatggagagaagtggtgggatctaccctgc
aaacctcaccggggtcctaatggatcgacatcaaaaggaccatgtgttagccctgcgtta
attcggttcttcatgagctccaatttggaagtcagtggcttgaaaatccaaaacagtcct
caattccatatgaaatttgatggctgtgaaggtgttttgataaaaaaactgtccatatct
tctcctaaactcagccccaatactgatgggatccacatagagaacaccaaggctgttggc
atatacgattctttcattagcaatggtgatgattgcatatcaatcggaacaggatgctcg
aatgtggatattgatggtctcacttgtggtcccagtcacgggattagcattggaagccta
ggagtacacaattcccaggcatgcgtaagtaacataaccgtccgaaatacaataataaaa
gaatcagacgatgggctaaggatcaagacatggcagggcggcacgggttgtgtatcagac
ataaactttgaaaacatccaaatggagaatgttaggaactgcattatcatagaccagtac
tactgcctatcaaaggcttgtcaaaatgagacctcagctgtctatgtcacaggcgtgaca
tacaggaacattaagggcacatacgatgttagaaccccaccaatacacttcgcctgtagt
gacacagtagcctgcaccaatatactgctatcagaggtcgagcttctccctgaagaaggt
gagttggtggatgatccattttgttggaatgcttatggaactgaagaaacagtgactatt
cctcccataaattgcttacgagaaggagagcctgagggtctacgagagatctcctcttat
ggttgctaa
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