KEGG   Populus trichocarpa (black cottonwood): 18102624
Entry
18102624          CDS       T01077                                 
Name
(RefSeq) polygalacturonase At1g48100
Organism
pop  Populus trichocarpa (black cottonwood)
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3
Other DBs
NCBI-GeneID: 18102624
NCBI-ProteinID: XP_006378559
UniProt: U5G278
LinkDB
Position
10:16162493..16165236
AA seq 482 aa
MEIIRGILAICIAVSFLLYNSSNVEGRSRYHKPKNKSSKNPEPPVSPTPYNAPDPQNPTA
PSSPSNSPSIPSDPYPNDPGNTSSDYIFNVMDYGAVGDGSTDDTNAFRQAWKEACGVESG
VILAPSGYSFMITSTIFSGPCKPGIVFQVDGCLMPPDGPDSWPEKDSTQQWLVFYRLDGM
TLTGEGTIEGNGEKWWDLPCKPHRGPNGSTSKGPCVSPALIRFFMSSNLEVSGLKIQNSP
QFHMKFDGCEGVLIKKLSISSPKLSPNTDGIHIENTKAVGIYDSFISNGDDCISIGTGCS
NVDIDGLTCGPSHGISIGSLGVHNSQACVSNITVRNTIIKESDDGLRIKTWQGGTGCVSD
INFENIQMENVRNCIIIDQYYCLSKACQNETSAVYVTGVTYRNIKGTYDVRTPPIHFACS
DTVACTNILLSEVELLPEEGELVDDPFCWNAYGTEETVTIPPINCLREGEPEGLREISSY
GC
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggagatcattcgcggtattttagccatttgcattgcagtgtcctttctgctttataat
tccagcaatgtagaaggaaggtcccgttaccacaagccaaagaacaaaagctccaaaaat
ccagagccccctgtttctccaaccccttataatgccccagatcctcaaaaccccactgcc
ccttcatctccttctaattctccttcaatcccttcagacccttatccgaacgatcctgga
aacacaagttcagactacattttcaatgtcatggattatggggcagttggtgacggttcc
actgatgacactaatgcattcaggcaggcctggaaagaagcttgtggagtggaatctggt
gttattctggctccttcaggttattctttcatgatcacttcaactattttctcaggtcca
tgcaagccaggaattgtgtttcaggtggatgggtgcctaatgccgccggatggaccggat
tcctggccagagaaggatagcacgcagcaatggcttgtgttttatcgacttgacggtatg
actctcacaggagaaggaaccattgaaggaaatggagagaagtggtgggatctaccctgc
aaacctcaccggggtcctaatggatcgacatcaaaaggaccatgtgttagccctgcgtta
attcggttcttcatgagctccaatttggaagtcagtggcttgaaaatccaaaacagtcct
caattccatatgaaatttgatggctgtgaaggtgttttgataaaaaaactgtccatatct
tctcctaaactcagccccaatactgatgggatccacatagagaacaccaaggctgttggc
atatacgattctttcattagcaatggtgatgattgcatatcaatcggaacaggatgctcg
aatgtggatattgatggtctcacttgtggtcccagtcacgggattagcattggaagccta
ggagtacacaattcccaggcatgcgtaagtaacataaccgtccgaaatacaataataaaa
gaatcagacgatgggctaaggatcaagacatggcagggcggcacgggttgtgtatcagac
ataaactttgaaaacatccaaatggagaatgttaggaactgcattatcatagaccagtac
tactgcctatcaaaggcttgtcaaaatgagacctcagctgtctatgtcacaggcgtgaca
tacaggaacattaagggcacatacgatgttagaaccccaccaatacacttcgcctgtagt
gacacagtagcctgcaccaatatactgctatcagaggtcgagcttctccctgaagaaggt
gagttggtggatgatccattttgttggaatgcttatggaactgaagaaacagtgactatt
cctcccataaattgcttacgagaaggagagcctgagggtctacgagagatctcctcttat
ggttgctaa

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