Populus trichocarpa (black cottonwood): 18103524
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Entry
18103524 CDS
T01077
Name
(RefSeq) 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X1
KO
K14760
o-succinylbenzoate---CoA ligase [EC:
6.2.1.26
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00130
Ubiquinone and other terpenoid-quinone biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01240
Biosynthesis of cofactors
Module
pop_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
18103524
Enzymes [BR:
pop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.26 o-succinylbenzoate---CoA ligase
18103524
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
18103524
NCBI-ProteinID:
XP_024467449
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Position
11:18891418..18896965
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AA seq
570 aa
AA seq
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MANYSQAHICQCLTRLSTLRSTSVVTISGNRQKTGHQFVGDVLSLAHGLLQLGLGNGDIV
AICGFNSDWYLEWLLAVAFVGGIVAPLNYRWVSTSPACSFEEAKSAMLMVRPVMLITDES
CKHWYQELQSNALPSVKWHVFSGSPSSGFVKTSNVLTTETLRKHVIGTKQLDYSWAPEGA
VIICFTSGTTGRPKGVIVSHSAMIVQSLAKVAAVGYSEDDVYLHTAPLCHIGGLSSAITM
LMVGGCHVLIPKFEASLAIEAIKQHCVTSLITVPAMMADLISLTRLKETWKGRQYVKKLL
NGGGSLSAELMKDATELFPRAKLLSAYGMTETCSSLTFMTLHDPTLQTPAQTLQTVDKTK
SSSAHQPHGVCVGKPPPHVELKISADEPSTIGRILTRGPHLMLRYWDQNPMKATESTNDF
WLDTGDIGSIDDCGNVWLVGRQNAQIKSGGENIYPEEVEAMLLQHPGVIATVVVGVPEAR
LTEMVVACIKLRQSWQWTNNNCKQSAENNLTLCREVLRDYCREKKLTGFKVPKLFILWRK
PFPLTTTGKIRRDQVRREVMSHLQFFPSNL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggctaattactctcaagcccacatttgccagtgcctgaccagactatcaactctacgt
tcaacttctgtggttaccatctctggtaacaggcaaaaaacaggacaccagtttgtggga
gatgttttgtctttggctcatgggctgcttcaacttggtcttggcaatggtgacattgta
gccatctgtggtttcaacagtgactggtatttggagtggttacttgctgtcgcatttgtt
ggaggcatagttgctcctttgaattaccgatgggttagtacatcacctgcctgtagcttc
gaagaagcaaaatcagcaatgttaatggtaaggccagtgatgctgatcactgatgagagc
tgtaaacactggtatcaagagctccagagtaatgctttaccttctgtcaagtggcatgtt
ttttcaggttccccttcttctggttttgtaaaaacatcaaatgtgttaactactgaaaca
cttaggaagcatgtcataggaactaaacaattggattactcctgggcacctgagggcgct
gtcataatatgcttcacttcaggaaccactggaaggcccaagggagttatcgtaagccat
tcagctatgatagtacagtccctagcgaaagttgctgctgttggttacagtgaggatgat
gtttatttgcacactgctccattgtgccatattggtggattgtcatcagccataaccatg
ctaatggtcggaggttgccatgtcttgataccaaaatttgaggcttcgttagccatagaa
gctatcaagcaacattgtgttacttctctaatcactgtcccagcaatgatggctgatttg
atttccttaaccaggttgaaagaaacttggaaagggaggcaatatgtgaagaagctatta
aatggaggtgggagtctgtcagctgagcttatgaaagatgccactgaattgttcccaaga
gctaagcttctttcagcttacgggatgacagagacatgttcttctctaactttcatgacc
cttcatgatccaacacttcaaacccctgctcagactctgcagacagtggataaaacaaaa
tccagttcagctcaccaaccacatggtgtatgtgttggcaaacctccaccacatgttgaa
ttaaagataagtgctgacgaaccttctaccattggcagaattttaactagaggtccccat
ctaatgcttagatattgggatcagaatccaatgaaggcaacagaatccaccaatgatttt
tggcttgacacaggtgacattggttccatagatgactgtggcaatgtatggctcgttgga
cgacagaatgcccaaatcaagagcggtggagagaacatttaccctgaagaggtggaagca
atgttgttgcaacatccaggagttattgccactgttgtagtgggagttccagaagctcgt
ttgacagagatggttgttgcttgcattaaattaagacaaagttggcaatggaccaataac
aactgtaaacaatctgcagaaaacaatctaaccttatgcagagaggttctcagagactac
tgtagggaaaagaaattaaccgggtttaaagtgccaaagctatttattttatggaggaag
ccatttccactgacaacgactggaaagataagaagggaccaagttcgaagggaagttatg
tctcatctacaattcttccccagcaatctttga
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