Populus trichocarpa (black cottonwood): 18105187
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Entry
18105187 CDS
T01077
Name
(RefSeq) scarecrow-like protein 6
Organism
pop
Populus trichocarpa (black cottonwood)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
18105187
NCBI-ProteinID:
XP_024441223
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Position
14:3891936..3895102
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AA seq
699 aa
AA seq
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MKAMPLPFENFQGKGVLDFSSSTTSSPDSLHLHHQKWQNNNSKESCGFFLGSTEPTSVLD
TISRQSPPTSSSTLSSSQGGGGGGGGASTDTTNGVAAAGGSNPCVDEKCGQQLGMEDWES
VLPGSPSQEQSILRLIMGDIEDPSVGLHKLLQSGSRSEDMEHASGFGVVDQVFGFDVSSM
SSASANLVANNSIDPSSIHGINLLPGLFQQQQQQAAFDQDEKPQILNPVMISNQNQHQFV
QNPATPFPFSYSQLQEHHNNQHFLSPPPSKRLNSGPVGVNYVPKVFDSRPPELFLPRQHQ
QQQQNHQFRMLQQLQQRQGMITNQKIASDELANQQQLQQAIINPICQAAELIETGNPVLA
QGILARLNHQLSLPIGKPYQRTAFYFKDALQLLLHTSNNNSIDNACSLIFKIGAYKSFSE
ISPILQFANFTCNQVLLEASEGFERIHIVDFDIGYGGQWASLMQELALRTGGAPSLKITA
FASPSSHDELELGFTRENLRIFASEINMPFELEILSLESLGSGSWPMPLRMPEKEVTAVN
LPIGSFSNDTSTLPLALRFVKHLSPKVVVSLDRGCDRSDLPFAHHVNHAIQSYSTLLESL
DAVNVNLDALQKIESFLVQPGIEKIVLGRHRCPDRTSPWRSLFLQSGFTPLPFSNFTESQ
AEYLVHRTPVRGFHVEKRQSSLVLCWQRKDLIAASAWRC
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccatgcccctacccttcgagaactttcaagggaagggggtgttagatttctct
tcgtctactacttcctctccagattcactgcatctacaccaccagaagtggcagaacaac
aacagcaaagaaagttgtggtttttttttgggcagtactgagcccacatctgtgcttgat
acaataagcagacaaagcccaccaacatcgtcctcaacactgtcttcttctcaaggcgga
ggtggtggcggcggaggagcctccaccgacaccaccaacggtgtggcagcagctggtgga
agcaacccttgtgtagatgaaaaatgtggacagcaacttggaatggaggattgggagagt
gtgttgccaggttctcctagtcaagagcagtcaattttaaggctaattatgggtgatatt
gaggacccatccgtgggacttcacaaactgttacaaagtggaagtaggtctgaagatatg
gagcatgcgtcgggttttggtgttgtagatcaagtttttggctttgatgtatccagtatg
agttctgcaagtgccaatttggttgccaacaacagcattgatccttcttcaatccatggg
atcaatcttttaccagggttgtttcagcaacaacagcagcaggcagcatttgatcaagat
gagaagccgcagattttgaatccagtgatgataagcaaccaaaatcaacatcagtttgtg
caaaatccagctacgccttttccattctcatattcgcaattacaagagcatcataataac
cagcatttcttatcaccaccgccgtcgaaaaggcttaattctgggcctgttggagtcaat
tatgtgccaaaagtctttgattcgaggcctccagagttgtttcttccacgacaacatcaa
cagcagcagcagaatcatcagtttcgaatgttgcagcagctgcagcagaggcagggaatg
atcacgaatcagaaaattgcaagcgatgaattggcaaaccagcagcagcttcaacaggca
ataataaacccgatatgtcaagcagcagagctgatcgaaactgggaatccggtacttgcg
caagggatattggcgcggctcaatcaccagctctctcttccaatcggtaagccttaccaa
aggacagctttttacttcaaggatgccttgcagttacttctccatacgagcaacaacaac
tcaattgataatgcttgtagcctgattttcaagatcggtgcttataaatctttctctgag
atctcaccaatccttcagtttgcgaattttacttgcaaccaagttcttctcgaggcttct
gagggttttgagagaattcatattgttgattttgatattggatatggtggacaatgggct
tctcttatgcaagaactggctttgaggactggaggtgccccttctcttaaaatcacagct
tttgcttctccttcctcacatgatgagctcgagcttggtttcactcgagaaaatttaaga
atctttgcaagtgaaatcaacatgccattcgagcttgaaattttaagccttgaatccttg
ggttctggttcttggccaatgcctcttcgcatgccggaaaaggaagtaactgctgtgaat
cttccaattggctccttttcaaatgacacatcaactcttcctttggcgcttcgctttgta
aagcatctctcacccaaagtcgtggtctctttggacagaggctgtgaccgaagcgacctc
ccatttgcgcaccatgtaaatcatgccattcaatcttattcaaccctgctggaatcactg
gatgccgtgaatgtgaacctagatgcattgcaaaagattgagagttttttggtgcagcca
ggtattgagaaaattgtattgggtcgtcatcgttgccctgataggacttctccttggagg
agtctctttttacagtctggtttcactccattgcctttcagtaactttaccgagtcacaa
gccgagtatttggtgcatcgtactccagttaggggtttccatgtcgaaaagaggcaatct
tcgcttgttctttgctggcaacggaaggacctcatagcagcttctgcttggaggtgttaa
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