Populus trichocarpa (black cottonwood): 18106559
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Entry
18106559 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: trans-cinnamate:CoA ligase, peroxisomal-like
KO
K23618
acyl-activating enzyme 11/12 [EC:
6.2.1.2
6.2.1.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pop01004
]
18106559
Enzymes [BR:
pop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.2 medium-chain acyl-CoA ligase
18106559
Lipid biosynthesis proteins [BR:
pop01004
]
Acyl-CoA synthetase
Short/medium chain acyl-CoA synthetase
18106559
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
18106559
NCBI-ProteinID:
XP_052304734
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Position
17:complement(13973359..13975561)
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AA seq
587 aa
AA seq
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MDQLLKCDANYVPLTPITFLKRANAVYANRTSVIYEGTRFTWSQTYERCCRLADSLRSLN
VGKNDVVSVLAPNIPAVYEMHFAVPMAGAVLNTINTRLDARNIATILSHSGAKVFFVDYQ
YKELASKALSFLDGAVPSIIACIDDIDTPTGVQFGQLEYEQLVQRGNPGYTDELVQDEWD
PIALNYTSGTTSAPKGVVYSHRGAYLSSLSLILGWEMGNAPVYLWSLPMFHCNGWTFTWG
VAARGGTNVCLRNTSAKDMYNNIAEHAVTHMCCAPIVFNILLEARPHERREITSPVEILT
GGAPPPASLLQKIERLGFHVTHAYGLTEATGPALVCEWQKKWNKLPQQDQAKLKARQGIS
ILTLADADVKDLDTMVSVPRDGKTMGEIVLRGSSIMKGYFKDPEATSKAFRNGWLATGDV
GVIHPDGYLEIKDRSKDVIISGGENISSVELESVLYRHPRVLEAAVVAMPHPRWGESPCA
FISVKKNSSGDTNDVKESDIIAYCKKNLPRFTVPKRVEFMAELPKTSTGKVLKIQLRALA
QNFVVNAEILPSKKITGHSQPSASGQVNTVVTGYAQGHEQVLALSRL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggatcaactactaaaatgcgatgcaaattatgttcctctcacccccataactttcttg
aagagagctaatgctgtttatgccaaccgtacctctgttatctatgagggcacccgcttc
acatggagtcaaacatatgaacgttgctgccgccttgccgattccctccggtcccttaac
gtcggaaaaaacgatgtcgtgtctgtgttggctccaaacattcctgcagtatatgagatg
cattttgctgtgcctatggctggagcagttcttaatactatcaacacaaggctagacgct
aggaatatagccaccattcttagccattcaggggctaaggttttctttgtggattatcaa
tacaaggagttagcaagtaaggcccttagtttcctggatggtgctgtaccatcaattatt
gcttgtattgacgacatcgacacacctaccggtgtccagttcggccagctggagtatgaa
cagcttgtccagaggggcaatccaggatacactgatgagctagttcaagatgaatgggat
cctatagccttgaattatacatcaggaacaacatctgctccgaaaggagttgtgtatagt
cacagaggtgcttatcttagctctcttagcctaattcttggatgggaaatgggaaatgca
cctgtttatctatggtctctccctatgttccattgcaatggctggacattcacttggggt
gtcgcggcacgaggcggaaccaacgtttgcctacgcaacaccagtgctaaagacatgtac
aataacattgccgaacatgcggtgactcacatgtgctgtgcaccaattgttttcaacatt
ctgcttgaggccaggcctcatgagcgccgcgaaatcacttccccggttgaaatactcaca
ggaggggcacccccaccagcctcgttgctccaaaagatcgaacgtctcggattccacgtg
acgcatgcctatggtcttaccgaggctactggtccagcacttgtgtgtgaatggcagaaa
aagtggaacaagcttccacagcaggatcaggcaaaactcaaggcgaggcaagggattagc
atactgactcttgctgatgcagacgtcaaggacttggacaccatggttagcgtgccgcgt
gatggaaagacaatgggggagattgtcctgagaggaagcagcatcatgaaaggttacttc
aaggatccggaggcaacttccaaggccttcaggaatggatggttagctactggagatgtt
ggtgtcattcatcctgatggttacctggaaatcaaggacaggtcaaaagatgtgataatt
tctggtggtgaaaatatcagcagtgtagaattggagtctgtactctacagacatccaaga
gtcctggaagcagctgtggtggccatgccacatcctagatggggagaaagtccttgtgca
ttcatctcagtgaaaaagaactccagcggagacacgaacgatgtcaaagaatctgatatt
atcgcttactgcaagaaaaaccttccccgttttacggttccaaagagagtggaattcatg
gctgagttaccaaaaacctcaacaggaaaagttctgaagatccagttaagggctttggcg
cagaattttgttgtcaatgcagagatattgccaagcaagaaaattactggacacagccaa
ccttcagcttccggtcaagtcaatacagtagtaacaggatatgctcagggccatgaacaa
gttcttgctctatctcgtctttga
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