Populus trichocarpa (black cottonwood): 18107017
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Entry
18107017 CDS
T01077
Name
(RefSeq) histone-lysine N-methyltransferase ATXR3 isoform X1
KO
K22748
[histone H3]-lysine4 N-trimethyltransferase ATXR3 [EC:
2.1.1.354
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00310
Lysine degradation
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
18107017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
18107017
Enzymes [BR:
pop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
18107017
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
18107017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDG2_C
SET
GYF_2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
18107017
NCBI-ProteinID:
XP_024444735
LinkDB
All DBs
Position
17:complement(2728894..2741898)
Genome browser
AA seq
2495 aa
AA seq
DB search
MGSGGVACMPLQHGSNNIIMEERFPVQEQPTAAAAAMTTTATTACGGGKTVNSNSNISSA
DNDNNNNGSSGDKKDNGKVNASSNGVTGKLKRVKRIIKVKKVVRRVVLGEKKGVGLDKAV
KGAGGSGSKEVAVLEKKESGLKTEEKSKEVAAEKKESGLKKEDKSKEVAAEKKESGLKSS
SGSKIVENGDGLGSGDSKVQSGSNNIKEEVEEGELGTLRWPSKGEIENGEFVPTPEKPRR
SEIERGEIGSGKWKKGDIEKGEIVSGNKWRKGEAVRDEIEKGEFIPDRWNIKDEYGYNKS
RGRHDMSSERTPPSGKYSSEDVYRRKELSRSGGMRWESGQERSTRISSKIVDEEGSYKSE
YSNGKSHEREHASGNRLKRHVTDSDNTERKYYGDYAISKSRRLSEDGSRYAYSEHYSRHS
VERFYKSSSYSRVSSSDKYSSRHHEPTLSSKVVYDRHSHSDRSPHDRPRYYDHRDRSPIR
YEKSPYGREKTPFGHERSPYGRERSPYGRERSPYWRDRSPDGHDRSPYGREKSPYGRERS
PYVLEKSPYDRSSYNEHRKRSPAYFERSPQDRTRHHDRSDRTPSYLERSPHDRARPTNHR
EASRKGAAHEKRSSQYGNKKQDDKISQKDPAVKDTELSAKESQDKSSVHNLDGLDEKNTS
SETRLEEKSESPVINAKESPKVDGPPPEELQSMEEDMDICDTPPHVPVVADTSTGRWFYL
DHFGVECGPSKLCELKALVDEGILMSDHFIKHLDSDRWLTIENAVSPLVTVNFPSVVPDV
ITQLVSPPEAPGNLLADTGDIVQSCSQIGEGVPGNLLQPLVCPNHSAVASEPLEDLQIDE
RVGALLEGFSVVPGSEIETVGEALQMKFEHVQWEGWIKAEGFAWYLASTAEQQDQNSNEL
LGHSDLITKEAVEAWPGSLADKDDGFASSVDSADWFSGRWSCKGGDWKRNDESVQDRFTR
RKVVLNDGFPLCHMTKSGCEDPRWQRKDDLYFPSQSRKLDLPPWAFSSTDERNDTGGVSK
STLNKPPITRGVKGTVLPVVRINACVVQDHVSETRTKVRGKDRYHSRAARTHSATNDVKR
SSVESDSQSKVVNDPDSHGCWKSTAPLNTPKDCLCTADDLQLNLGEWYYLDGAGHEQGPS
SFSELQNLADIGTIQKYSSVFRKFDRVWVPITSATETFGASVKIQQSNVEPVIGSSGTLS
KSQTASNIESDRSSSSFHSLHPQFIGFTRGKLHELVMKSYKNREFAAAINEALDPWIVAK
RPPKEIDKHMYLKSGMEIDARAGKRARMQPAQNDEDYEMEEGTLHKDETTFEQLCGDTNF
HREESMCSEIEAGSWGLLDGHMLARVFHFLRSDMKSLVFASLTCKKWRSAVSFYKGISIQ
VDLSSGAPNCTDMMVRSIMNGYNKEKINAMVLAGCKNITSGMLEEILRSFPCLSSIDIRG
CTQFMELALRFPNISWLKSRTRISVESNSKLRSLKQISERDDFGELKEYFDSVNKRDSAN
QLFRRSLYKRSKVFDARKSSSILPRDARMRRWAVKKSENSYRRMEGFLASGLKDIMKENT
FDFFVPKLTEIEDRMKSGYYVGHGLRAVKEDISRMCRDAIKVKNRGAGDMNHIITLFLQL
ASRLEESSKFSYERDELMKSWKDDVSTALDSAPIKHKKKAIDKKYMNRSNGTILANGSFD
FGEYASDQEIKKRISKLNRKSMDSGSETSDDRSSEDGRSGGGSTASDTESDLDFRSEGRP
GDSRGDEYFMTDEDEREWGARMTNASLVPPVTRKYEVIDQYVIVADEEDVQRKMSVSLPD
DYAEKLDAQKNGTEELDMELPEVKDYKPRKQLGDEVIEQEVYGIDPYTHNLLLDSMPEEV
DWPLSQKHMFIEDVLLCTLNKQVRHYTGAGNTPMTYPLQPVVEELEQAAMEDCDTRTMKI
CRGILRAIDSRPDDKYVAYRKGLGVVCNKEAGFRDDDFVVEFLGEVYPAWKWFEKQDGIR
LLQKDSKEPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCKPNCEAKVTAV
GGQYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQ
KVLKECHGLLDRHYLMLGACELNSVSEEDYLDLGRAGLGSCLLGGLPDWVVAYSARLVRF
INLERTKLPEEILRHNLEEKKKYFADICIEVERSDAEVQAEGVYNQRLQNLAVTLDKVRY
VMRCIFGDPKLAPPPLEKLTPKETVSFLWKEEGSLVEELLQCMSPHMDGEMLNDLKSKIY
AHDPSDSDDIPKAIQKSLLWLRDEVRSLPCTYKCRHDAAADLIHVYAYTKSFFRVREYDA
FTSPPVYISPLDLGPKCADKLGGLPHKYQKTYGENYCMGQLIFWHIQTNTEPDSTLAKAS
KGCLSLPDIGSFYSKVQKPSQQRIYGPKTVKMMLGRMEKYPQKPWPKDQIWSFKSSPKVF
GSPMLDAVLNKSPLDREMVHWLKHRPTVYQAMWDR
NT seq
7488 nt
NT seq
+upstream
nt +downstream
nt
atgggtagtggaggtgtcgcatgtatgcctttgcaacacggtagtaataatatcatcatg
gaagaaagatttcctgttcaagaacagcctacagcagcagcagcggcaatgacgacgacg
gctacgacagcttgcggaggtgggaaaactgtaaacagcaatagtaacatcagtagtgct
gataatgataataataataatggcagtagtggtgacaaaaaggataatgggaaagttaat
gctagcagcaatggggtgactgggaagctgaagagggtgaagaggataattaaggtgaaa
aaagtggtgaggagagtagtgttgggggagaagaaaggagtgggattggacaaagcagtt
aagggtgctggtggtagtggtagtaaggaagtagcggtgttggagaagaaagaatcaggg
ttgaagacggaagagaagagcaaggaagtggcagcagagaagaaagaatcaggattgaag
aaggaagataagagcaaggaagtggcagcagagaagaaagaatcaggattgaagagtagt
agtggtagcaagatagttgaaaatggtgatggtttgggttctggggatagtaaggtacag
agtggtagtaataatattaaagaggaagttgaagagggggaattggggacattgaggtgg
ccatcgaaaggggaaattgagaatggagagttcgttcctacaccagagaagccaaggaga
agtgagattgaaagaggagagattggtagtgggaaatggaagaaaggggatatagagaaa
ggggagattgtttctggtaataaatggcggaaaggggaagctgttcgagatgaaattgag
aaaggtgagttcattccagacaggtggaatattaaagatgagtatggctacaacaagtct
cgtggcaggcatgacatgagtagcgagcgtacgccgccttctgggaagtattctagtgag
gatgtttacagaaggaaagagttgagtagaagtgggggtatgaggtgggagagtggccag
gaaaggagtacgaggataagctcaaagattgttgacgaagaaggttcatataagagtgag
tacagcaatggcaagagccatgaaagggagcatgcttctggtaacagattgaagcgtcat
gtcactgattctgataataccgagcgcaaatattacggggattatgccatttctaaaagc
aggagactttctgaggatggttctcgctatgcttactcagagcactattcacgtcactca
gtagagaggttctataaaagctcttcttattcgagagtatcttcatcagacaagtactca
tccaggcatcatgaacccactttgtcctctaaggttgtttatgacaggcatagtcattct
gaccggtccccacatgataggccccgatactatgatcacagggaccgaagtccaatccgt
tatgagaaatctccctatggccgagaaaagacaccatttggacacgagagatctccatat
gggcgagaaaggtctccatatggacgtgagaggtcaccatattggcgggacagatcccca
gatggacatgatagatccccctatggacgtgagaaatccccatatggacgagagagatct
ccgtatgtacttgagaaatcaccatatgaccgaagcagctataatgagcatagaaaaagg
agtcctgcttatttcgaaaggtccccacaggatcgaacccggcaccatgatcgcagtgat
aggacaccaagttacttggagcgatccccacatgaccgggctaggcccactaatcacaga
gaagcaagtcgaaagggggcggcacatgagaagcggagctctcagtatggtaataaaaag
caggatgataagatcagccaaaaggatcctgcagtaaaggacactgaactctcagctaaa
gaatctcaagataaaagcagtgtgcataatcttgatggtttggatgaaaagaataccagc
agtgaaactcgcttagaagagaaatctgagagccccgttataaatgccaaagagtctcct
aaagttgatggacctcctccagaagagctgcaatcaatggaggaagatatggatatatgt
gatacgccaccacatgtccctgtggtggctgacacatcgactggtagatggttttaccta
gatcattttggtgtggaatgtggcccttcgaagttatgtgagcttaaggcgcttgtcgat
gaaggaattcttatgtctgatcacttcatcaagcacttggatagtgataggtggttaact
attgagaatgcagtttcaccgttggtgactgtgaatttcccatcagttgtgccagatgtt
ataactcagctagtaagccctccagaggcacctggtaatctattggcagatactggagat
atcgtgcaatcttgttctcagattggcgagggagtgccagggaatttgctgcagccactg
gtctgccctaatcacagcgcagttgcatctgagcctttagaagatctccagattgacgaa
agagttggagccctgttggagggtttttctgttgttcctggcagtgagatagagactgtt
ggagaagctctgcaaatgaaatttgaacatgtgcaatgggaggggtggataaaagcagaa
ggttttgcttggtatctagcttccactgctgaacaacaggatcaaaacagtaatgaatta
ctaggacattctgatttgataacaaaagaagctgttgaagcatggccaggttctcttgct
gacaaggatgatggctttgcctcttctgttgattccgctgactggttttctggtcgatgg
tcttgcaagggtggggactggaagaggaatgatgaatctgtccaggatagatttaccaga
aggaaagttgttctcaatgatggattcccattatgccacatgacgaagtctgggtgtgag
gacccacggtggcaaagaaaagatgatttgtattttccttctcaaagtaggaagcttgac
ctccctccttgggctttctccagtacagatgagagaaatgatactggtggtgtcagtaaa
tcaactctcaataaacctccaataacaaggggagtgaaaggaaccgtgctaccagtagtt
aggataaatgcatgcgtggttcaggaccatgtttctgaaacccgtactaaagttcgaggg
aaggacagatatcattcaagagctgctcggacacattctgcaactaatgatgtgaagaga
tcatcagtagagagtgattctcaatccaaagttgtcaatgacccagattcacatggctgt
tggaagtctactgcgccacttaatactcccaaagactgtctctgtacagcagatgactta
caattgaatttgggtgagtggtactacttagatggtgctgggcatgaacaagggccatca
tcattttcagagcttcagaacttggcagatataggtaccatccaaaagtatagtagtgtt
ttcaggaaatttgatagagtgtgggttccgattacctcagccaccgagacttttggagcc
agtgtcaaaattcaacagtcaaatgttgagccagttattggttcttcaggaaccctttca
aaatcccagactgcttccaacattgagagtgacagaagttccagttcatttcacagcctt
catccacagttcattggttttacccgtgggaagctacatgaattggtaatgaaatcatac
aaaaacagggagtttgcagctgccataaatgaggctttggatccttggattgttgcaaaa
cggcctccaaaagagatcgataaacatatgtatctcaaatcaggtatggaaatagatgca
cgtgctggaaaaagagcccggatgcagcctgcccaaaatgacgaggattatgaaatggag
gaaggcacattgcataaggatgaaaccacttttgagcaactatgtggtgataccaatttc
cacagagaagagagcatgtgttctgagattgaggcgggaagctggggtttattggatggt
catatgctggcacgagtctttcatttcctgagatctgacatgaaatccctagtctttgct
tccttgacttgtaaaaagtggagatctgctgttagtttttacaagggcatatcaattcaa
gttgatctttcctctggggcccccaactgtaccgacatgatggtgaggagtatcatgaat
ggttataacaaagaaaaaattaatgcaatggtgctggcgggttgtaagaatatcacatct
ggcatgcttgaagaaattcttcgctctttcccatgtttatcttctatagatattagaggt
tgcacccaattcatggagttggcccttcgatttccaaatattagctggctcaagagccgc
accaggatctctgtggagtcaaattctaaattaaggagtcttaaacaaatcagtgagaga
gatgattttggggaactcaaggagtattttgatagtgtgaacaagagagactcagctaat
caattatttcgtcgaagtttgtacaaacgctcaaaagtgtttgatgctagaaagtcatca
tccattctacccagggatgctcgtatgaggcgatgggcagttaagaaatctgaaaatagc
tatagaaggatggaggggtttctagcttcaggtttaaaggacataatgaaggaaaatacc
tttgatttttttgtgcctaagttgacagaaattgaggataggatgaagagtggctattat
gttgggcatggattgagggctgtcaaggaggatattagtcgaatgtgcagggatgcaatt
aaagtgaagaatcggggtgctggagacatgaatcacatcattacattgtttctccaacta
gcctctcggttggaagagagttctaagttttcttacgaaagagatgagctcatgaagtca
tggaaagatgatgtatctacagcattggactctgctccaattaaacataagaagaaagct
attgataagaagtacatgaataggagcaatggtactatacttgctaatggtagttttgat
tttggagaatatgcatctgatcaggaaattaagaagcggatatccaaactgaatagaaaa
tccatggattcaggaagtgaaacttctgatgaccggtcttctgaagatggcaggagtggt
ggtggtagtactgcctcagatacagaaagtgatttggatttccgatcagaaggccgacct
ggggactcaagaggagatgaatactttatgacagatgaggatgaacgtgaatggggtgct
cgcatgacaaatgcgagtctggttcctcctgttactaggaagtatgaagtcatagaccaa
tatgttattgtagcagatgaggaggatgtccagcgaaaaatgtctgtgtctttgccagat
gactatgctgagaagcttgatgcacagaaaaatggcaccgaggaactggatatggaactt
cctgaagttaaggattacaaacctagaaaacagcttggagatgaagttatagaacaggaa
gtttatggaattgatccctatacccacaatcttttacttgattccatgcctgaagaagtg
gactggcctctgtcacaaaaacacatgtttattgaagatgtgctactctgtactctgaat
aagcaagtcaggcactatactggtgccgggaacactccaatgacatatcctttacaacct
gttgttgaagaacttgaacaagctgctatggaggattgtgacacaagaacaatgaaaatc
tgccggggtatcttgagagccatagatagtcgacctgatgacaaatatgttgcttaccgg
aaggggcttggtgttgtatgcaacaaagaagctggttttcgagatgatgactttgttgtg
gagtttttgggagaggtatatcctgcgtggaaatggtttgagaagcaagatgggattcga
ttattacagaaggacagtaaagagccagctccagaattttacaacatttatcttgagagg
ccaaagggtgatgctgatggttatgatttggttgttgttgatgccatgcacaaggcaaac
tatgcaagtcgaatctgtcactcatgcaaacctaattgtgaagcaaaagttactgctgta
ggtggtcagtaccagattggaatctactctgtgcgtaaaatccaacatggcgaggagata
acctttgattacaattctgtgacagagagtaaagaagaatatgaagcatctgtctgtttg
tgtggtagccaagtttgcaggggcagctacttaaatttgactggtgaaggggcttttcaa
aaggtgttgaaggagtgtcatggattactggatcgacattatttgatgctcggagcttgt
gaattaaattctgtgtctgaagaagattatctggacctgggtagggctggtttgggtagt
tgtttacttggtgggttgccagattgggtggttgcatattcagctcgtctggttagattt
ataaatctggaaagaacaaagcttcctgaggaaattctaaggcataatttggaagagaaa
aagaaatattttgcagatatatgtatcgaggttgagagaagtgatgctgaggttcaggct
gaaggtgtctacaaccagaggcttcaaaatttggctgttacacttgacaaggtgagatat
gtaatgaggtgtatatttggtgacccaaagctggctccacctccactggagaagcttact
cctaaagaaaccgtttccttcctctggaaagaagagggatcacttgttgaggaacttctg
cagtgcatgtctcctcatatggatggagaaatgctaaatgaccttaagtccaagatttat
gcacatgatccatcagattctgatgacattccgaaagcaatccagaaatcattattgtgg
ttgagggatgaggtccgcagtcttccatgtacatacaagtgccggcatgatgctgcagct
gacttaattcatgtttatgcttatacaaagagcttctttagagttagggaatatgatgca
tttacttctccaccggtctacataagtccacttgacttgggccccaaatgtgctgataag
ttagggggtcttccccacaagtatcaaaagacctatggtgagaactattgtatggggcag
ttgatattttggcatatccagactaacactgagcctgattctactcttgctaaagcgagt
aagggctgcttgtcattacctgatatcggttccttctactcaaaggttcagaagccatca
cagcagcgcatttatggcccaaagactgtgaaaatgatgttgggaagaatggagaagtac
cctcagaaaccgtggcccaaggaccaaatatggtcatttaagagttctccaaaagttttt
ggcagcccaatgctagatgctgtattgaacaagtccccactagacagagaaatggtacat
tggttgaagcacagacctacagtatatcaagcgatgtgggatcgatga
DBGET
integrated database retrieval system
