Populus trichocarpa (black cottonwood): 18107395
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Entry
18107395 CDS
T01077
Name
(RefSeq) probable CoA ligase CCL7
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00130
Ubiquinone and other terpenoid-quinone biosynthesis
pop00940
Phenylpropanoid biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
pop_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
18107395
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
18107395
Enzymes [BR:
pop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
18107395
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
18107395
NCBI-ProteinID:
XP_006373451
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Position
17:complement(12048053..12051789)
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AA seq
543 aa
AA seq
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MEKSGYGRDGIYRSLRPTLVLPRDSNLSLVSFLFRNSNSYPHKPALIDADLSITLSFSEL
KSIVIKFAHGLLNLGISKNDVILIFAPNSYQFPTCFLAITSIGAVATTANPLYTTSELSK
QIKDSNPKLVITVPELWDKVKGFNLPAVFLGPKEVSLPLESGSRIRSFHSLVELGGSNSE
FPVSDVKQSDIATLLYSSGTTGVSKGVILTHGNFIAASLMVSMDQVMAGEIHNVFLCFLP
MFHVFGLAVITYSQLQMGNAVVSMGKFEFEMVLRTIEKYRVTHMWVVPPVILALSKQNLV
KKYDLSSLRNIGSGAAPLGKDLMKECAKNLPDATIIQGFGMTETCGIVSLEDPRIGVRHS
GSAGILNAGIEAQIISVETAKPLPPNQLGEIWVRGPNMMRGYFNNPQATKDTIDKKGWVH
TGDLGYFDDDGQLFVVDRIKELIKYKGFQVAPAELEGLLVSHPEILDAVVTPYPDAEAGE
VPVAYVVRSPNSALTEEDVQKFISDQVAPFKRLRKVTFINSVPKSASGKILRRELVQKVK
SKM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatctggttatggccgtgatggtatatacaggtcattaagaccaacacttgtc
cttcctagggattctaatctttctttggtctcatttcttttcagaaactccaattcttat
cctcataaaccagctcttattgatgcagatttgtcaataaccttatctttttcagagctc
aaatccattgttatcaagttcgctcatggattactcaatctgggcatctctaaaaatgat
gttattcttatctttgctcccaattcataccaattccctacctgtttcttggccatcact
tccattggtgctgttgcaacaactgcgaatcctctttatacaacctcagagctttcaaaa
cagattaaagattctaatcccaagttggttatcacagtccctgagttatgggacaaagtc
aaaggcttcaatttgcctgctgtctttctaggaccaaaagaggtgtctttgccattggag
tcaggttcaagaatcagaagtttccattctttggttgagttaggagggtctaactctgag
tttcctgtgagtgatgtgaagcaaagtgatatagctacgcttttgtattcgtcaggtact
acaggggttagtaaaggagtgatcttgactcatgggaatttcattgctgcatctttaatg
gtcagtatggatcaagtaatggcaggtgagatacacaatgtgttcctttgtttcttgccc
atgtttcatgtgtttggcttggctgtgattacttactcacagctacaaatgggaaatgct
gtagtgtcaatggggaagtttgaatttgagatggttttgaggactattgagaagtataga
gtgacccatatgtgggttgtgcccccagtaatacttgctttgtctaaacagaatttggtt
aagaagtatgacctttcgtcattgagaaatattggttcaggcgctgctcctctgggaaaa
gatttgatgaaggaatgcgccaagaatttgccggatgctacaataattcagggctttggc
atgactgaaacttgtggcattgtttcattggaggatccgagaataggtgttcgacattct
ggttctgctggaatactaaatgcaggaattgaggcccagataatcagtgtggaaactgca
aagcctctccctcctaatcagttaggggaaatatgggttaggggacccaatatgatgaga
ggttatttcaataatccgcaagccacaaaagataccatagataaaaagggttgggtacat
actggagatcttggatattttgatgatgatggacaactttttgttgttgatcggattaaa
gagctcatcaagtacaaaggttttcaggtggcacccgctgagctagaagggctgctagtt
tctcatcctgaaattttggatgctgttgtcaccccatatcctgacgctgaagctggtgag
gtcccagttgcatatgttgtgcgctcacccaacagcgcactgacagaagaagatgttcag
aaatttatttctgatcaggttgcacctttcaaaagattgcggaaggtgactttcatcaat
agtgtacctaaatcagcttcaggaaaaatcctcagaagagagctcgttcagaaagtgaaa
tccaagatgtga
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