Populus trichocarpa (black cottonwood): 18107640
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Entry
18107640 CDS
T01077
Name
(RefSeq) pentatricopeptide repeat-containing protein At1g08070, chloroplastic
Organism
pop
Populus trichocarpa (black cottonwood)
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GFIT
Motif
Pfam:
PPR_2
PPR
DYW_deaminase
PPR_1
PPR_3
E_motif
PPR_long
TPR_19
Eplus_motif
TPR_17
PTS_EIIA_2
Motif
Other DBs
NCBI-GeneID:
18107640
NCBI-ProteinID:
XP_006371932
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Position
18:complement(8786029..8788408)
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AA seq
717 aa
AA seq
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MAAPLTLHHHIKPPLSSENPLLTRNPTSASTIGMIASSIDDPNQPHPCIVSIEKCSNMSQ
LKQIHAQMLRTGLFFDPFTASKIVAFCSLQDSGSLQYARLVFSQIPNPTSYTCNSIIRGC
TDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSEGKQIHCHSTKLGFASDTYAQ
NTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENV
KPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARD
LFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGA
LELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILG
LAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQP
TIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQL
LEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKG
DSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAFGLL
STSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRGFW
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcctctcactctccaccaccatattaaacctcccttatcttcagaaaatccc
ctcctcacgagaaaccccacctccgcctctactattggtatgatcgcaagcagcattgat
gacccaaatcaaccacatccatgtattgtttcgatagaaaaatgctccaacatgtcccag
ctcaagcaaatccatgctcaaatgctcaggacaggcctcttcttcgaccccttcaccgcc
agcaaaattgtggccttttgctctcttcaagactcaggaagtctccagtatgctcgtctt
gtcttctctcaaatcccaaatcccacttcctacacttgcaactctataattcgaggctgc
accgataagaacttgcatcaagaggcacttcttttctatcaagaaatgatggttcaaggc
ttgataccggatagatacacctttccctcattgttcaagtcttgcaggaattcatccgag
ggaaaacagatacattgtcactctacgaagcttggttttgcttcagatacatatgcccaa
aacaccttgatgaatatgtattcgaattgcggttgtttggtgtcagctagaaaggtgttt
gataaaatggaggataagactgtagtttcttgggcaaccatgatcggggtccatgcacag
tgggatcaacccaatgaagctgtgaggcttttcgatagaatgatgaagagtgaaaatgtg
aagcctaatgaggttaccttggttaatgtcttaactgcatgcgcaagggcgagagatttg
gctatggtgaaaaggattcatgagtacattgatgagcatggttttgggcgccacgttgtt
ctcaacacggttcttatggacgtttactgcaagtgtggatgtgtacaactagcaagagat
ttatttgacaaggcccaggaaaaaaacttgttttcttggaatatcatgataaacgggcat
gttgaagatagtaattatgaggaggctttactgctgtttcgtgagatgcaaaccaagggt
ataaaaggtgataaggtgaccatggcgagcctgctgctcgcttgcactcatctgggtgct
ctagagctgggaaagtggttacatgcctacattaagaagcagaggattgacgttgatgtt
gctttaggaacagctcttgtggacatgtatgccaagtgtggaagcatagaaactgcgata
caagtgtttcatgagatgcctgagaaagatgtaatgacttggacagctttgattctaggt
cttgcaatgtgcgggcaagcggagaacgctttacaatattttgatgagatgcatatcaag
ggagtcaagccggatgcaatcacatttgtcggggttttggctgcgtgcagccatgctggg
tttgttgatgaaggcatttcacattttaactctatgtctgatacctatggcattcagcct
accatcgaacactatggtggcttagttgatatactaggccgagctggtcgcatagctgaa
gcagaggaattgataaagagcatgccaatggcacctgatcaatttgttttgggcggtctt
cttggtgcctgcagaatccatggaaacctcgaggctgcagaaagagcagctaaacaactc
ttggagattgacccatatcattcgggaacgtatgtacttctgtcaaatatttataaatct
tcgaagaaatgggaggaagcaaagagaaccagggaattgatggcagaaagaggcatgaga
aagcctccaggttgcagccaaatcgaggttcacggagtagtccatgaattcgtgaagggg
gattcatcacaccgccaatcctcggagataaacgaaatgttggaggacatgattagcaaa
ctaaagaacgctggttatgttcctgacaaatcagaggtgttatttgacatggctgaagag
gaaaaggagaccgagcttagcctccatagtgagaagttggcaattgccttcggcctctta
agtacaagcgtcgggactccaattcgagttgtgaaaaacctgcgtatatgcagtgattgc
cacagtgcaactaagcttatctccaaactatacaatagggaaataatagtgagggacagg
aaccggtttcaccattttaaggacggaacctgttcgtgcaggggtttctggtga
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