Populus trichocarpa (black cottonwood): 18107849
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Entry
18107849 CDS
T01077
Name
(RefSeq) auxin response factor 19 isoform X2
Organism
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Populus trichocarpa (black cottonwood)
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
PB1
HTH_53
Motif
Other DBs
NCBI-GeneID:
18107849
NCBI-ProteinID:
XP_006372205
UniProt:
B9N847
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Position
18:complement(15066861..15075225)
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AA seq
1113 aa
AA seq
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MKSPANGAAAAVTNGEGVEKKSINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASL
KKDVNAQIPNYPNLPSKLLCLLHNVTLHADPETDEVYVQMTLQPVSSFDKDALLRSDLAL
KSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKTFPPLDFSMQPPAQELVARDLHDNVW
TFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFMRDEKQQLLLGIRRANRQPTNLSS
SVLSSDSMHIGILAAAAHAAANNSPFTVYYNPRASPSEFVIPLAKYYKAVYSNQISLGMR
FRMMFETEESGTRRHMGTITGISDLDAVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIE
PVTAPFFICPPPFFRSKHPRQPGMPDDDSTDFDSLFKRTMPWLGDDIYMKDPQVLPGLSL
AQRMNMQQNPSLANSMQPNYMQSLSGSVLQNLPGGDLSRQLGLSSPQMPQPNNLQFNAQR
LPQQAQQLDQLPKLQSLLNPLGSIIQSQQQMGDITQQSRQNMMAQTLPSSQVQAQLLQPQ
TLAQTNNILQQQPSIQSHQLLRNLPQTLHQQQQNQQQHIMGQNQQQSLMQSQLSDQVNQH
MQMSDNQIQSQLMQKLQQQQQSVSAQQSAMHQAGQLGQLQDSQRQLLDASQSFSRSMTPS
QMLEIPQTTPTSLPQPNTIPQQMTKNNNQTNTRFSHLPQQLKPQQQHSGIMLLSEMAGHM
GLPPSSMANQLSTAGSSILTAAAGPGQSGITDDVPSCSTSPSTNNCPNIVQPMINGWAHR
STAMGEDMAQSAVTLFSPSALETVSSNGNLVKDLLQKSEVKPSLNISKNQNPGLFSSQTY
LNGVAAQIDYLDTSSSTTSVCLSQNDVHLQQNNNSLSYNPQSVLLRDASHDGELQGDPRN
NILYGTNIDSQLVMPINSDHLLTKGMMGLGKDFSNNFSSGGMLTNCENSKDPQQELSSAI
VSKSFGVPDMPFNSIDSTINDSSLLNRGSWAPPQQQFQRMRTYTKVYKRGAVGRSIDITR
YSGYDELKQDLARRFGIEGQLEDQQRIGWKLVYTDHENDVLLVGDDPWEEFVNCVRCIKI
LSPQEVQQMSLDGDFGNSVLPNQAGSSSDNVNA
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcaccggccaacggtgccgccgccgcagtcaccaacggtgaaggggtagagaag
aagagcataaaccctgagttatggcaagcatgtgcaggaccactagtgaacttgccggcg
gccggaactcatgtggtctacttccctcaagggcatagtgaacaggttgcagcatctttg
aagaaggatgtgaatgcgcaaattccaaactacccaaatcttccctcgaagctgctatgt
ctccttcacaatgtcaccttacatgcggaccctgaaacagatgaagtttatgttcagatg
acacttcaacctgtttcttcttttgacaaggatgcattattgaggtcagatcttgcactg
aagtcaaataaaccacagacagagtttttctgtaaaacattgacagcaagtgatacaagc
actcatggaggtttctccgtgcctcgccgtgcagctgaaaagacattcccgcctcttgat
ttctccatgcaaccacctgctcaagaacttgtagctagggatttgcatgataatgtttgg
actttccggcatatctatcgtggacaaccaaagcgtcacttgcttacaactgggtggagc
ttatttgtcagtgggaagaggctttttgccggtgactcagttttatttatgagagatgaa
aagcagcagcttctattgggcatcagaagggctaacaggcaacctaccaacttatcatcg
tcggtattgtcaagtgatagcatgcatattgggatcctagctgctgcagcccatgcagca
gcaaacaatagcccctttaccgtgtactataatccaagggcaagtccatcagaatttgtt
atccctttagccaagtattacaaggcagtgtacagcaaccaaatatcacttggcatgcgc
ttccgcatgatgtttgaaactgaagagtcaggaacaagaaggcatatgggcaccattact
ggtatcagtgatcttgatgctgtaagatggaaaaactcacaatggcgtaatttgcaggtt
ggttgggatgagtcaactgctggtgaaagacgcaatagagtctcgatctgggagatcgaa
ccagtgactgctccatttttcatatgtcctcctccattttttagatctaagcatccaagg
caaccgggaatgccagatgatgattccactgattttgatagcctattcaagaggactatg
ccttggcttggtgatgatatctacatgaaagatccccaggttctccctggcctaagccta
gcccagcgaatgaacatgcagcaaaacccttcactggcaaactcaatgcagcccaattat
atgcaatcgttgtcagggtctgttctgcagaatcttcctggaggtgatctttcccgccag
ttaggcttgtcatcacctcaaatgcctcagccaaacaacttacagttcaatgcccaaagg
ctgcctcagcaagcacaacagcttgatcagcttccaaagctacagtccttgctcaaccca
ctgggttccatcatacagtcacagcaacagatgggtgacatcactcaacaatcgaggcaa
aatatgatggctcaaactctaccctcaagtcaagttcaagcccaacttctgcagcctcaa
actcttgcccagaccaataacattcttcagcaacagccatctattcaaagccatcagctt
cttagaaaccttccgcaaaccttgcaccagcagcagcagaatcaacagcaacatattatg
ggtcagaaccagcagcaaagcctaatgcaatctcagttgtctgatcaagtaaaccaacat
atgcaaatgtctgacaatcagattcagtctcaactgatgcagaagcttcagcagcaacag
caatcagtttcagctcagcaatctgctatgcatcaggctggtcaacttggacagcttcaa
gattcacaaaggcagctgctggatgcatcccagagtttttctaggtccatgacacccagc
caaatgttggaaatccctcaaacaacacccacttctctccctcagccaaatactattcca
cagcagatgactaagaataacaaccaaaccaatactcgattctcacatctgcctcaacag
ctgaaacctcaacaacagcattctggcatcatgctgttgtcagaaatggctggtcacatg
ggacttccgccgagctcaatggccaatcagctctccacagctggtagcagtatattgact
gcagcagctggaccaggacagtctggtatcactgatgatgttccttcctgttctacttca
ccttccacaaacaattgtccaaacatagttcaaccaatgatcaacggctgggcccaccga
agcacagcaatgggagaggacatggctcagtctgccgtgacactctttagccctagtgca
ttggaaaccgtgtcctctaatggtaatttagttaaagatctgctgcagaaatctgaggtt
aagccatcattgaacatctccaagaatcaaaacccaggattattttcctcgcaaacatac
ctaaatggggtagctgcccagatagattatttggacacatcatcttctacaacttctgtt
tgcctatcacaaaatgatgtccatttgcagcagaataacaattcactgtcatataatccc
caatcagtgttgttgagagacgcaagccatgatggtgagctccagggagatccgaggaat
aatattttatatgggacaaacattgatagccaacttgtgatgccaataaattctgaccat
ttattaacaaagggcatgatggggctggggaaggacttctcaaataatttctcttcagga
ggcatgcttacaaattgtgaaaattccaaagatcctcaacaggagctttcatcggcaatt
gtttccaagtcatttggagttccagatatgccattcaattcaattgactcaacaatcaat
gacagtagcttattgaatagaggttcttgggctcctccacagcaacagtttcagcgaatg
cgaacatatacaaaggtgtacaagcgtggagctgtaggaaggtcaattgacataacgcgg
tattcaggttatgacgagcttaagcaggatctggctcgtaggtttggtatagagggacag
ttggaagatcaacaaaggataggctggaaacttgtttacactgatcacgagaatgatgtc
ctgctagtgggggatgatccttgggaagagtttgtgaactgtgtccgctgcatcaagatc
ctgtctcctcaagaagtccaacagatgagcttggatggagattttggcaactctgtcctt
cctaatcaagccggcagtagttctgataatgtcaatgcataa
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