Populus trichocarpa (black cottonwood): 18108403
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Entry
18108403 CDS
T01077
Name
(RefSeq) 2-methylpropanoate--CoA ligase CCL4
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
18108403
NCBI-ProteinID:
XP_006371374
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Position
19:complement(10810301..10812354)
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AA seq
550 aa
AA seq
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MEELKPTPASLSPLTPLAFLERTATVYGDCPSVIYNNSTYTWSQTHRRCLQVASSLSSYG
IKPGHVVSVVAPNIPAMYELQFAVPMSGAILNNINTRLDARTMSILLRHSESKLVFVDCL
SRDVILDAMSLLPPNTKRPPLVLIADDAEAAESSITDDFCCAYESMVEKGDPGFKWVQPH
SEWDPMVLNYTSGTTSSPKGVVHCHRSVFTITVGSLIDWGVPKQPVYLWTLPIFHANGWS
YPWGIAAVGGTNICLRKFDGPTIYSLIKRHGVTHMCGAPVVLTMLTNSTNKEPLRNPIQI
LTAGAPPPSAVLFRTESLGFVVSHGYGLTETAGLVVSCAWKPKWNTFPPSERARLKARQG
VKIVGFTEIDVLEPESGKSVKRDGVALGEVVLKGGCIMLGYLKDPTGTSKCMKDGWFYTG
DVGVMHQDGYLEIKDRSKDVIISGGENISSVEIESVLYTHPAVNEAAVVARPDEFWGETP
CAFVGLKDGLTQKPGEKDIIDFCREKMPHYMVPKTVVFKDELPKTSTGKIQKFVLRGIAK
GMGSSKGSRM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaggaactgaagccaacaccagcaagcttatctcctctcacaccattagctttcttg
gaaagaactgctactgtatatggtgattgcccatctgtcatctacaacaacagtacttat
acgtggtctcaaacccaccgtcgatgtctccaagtggcatcatctctgtcatcgtacggc
atcaagcctggccacgtggtctccgttgtcgcccccaacatccctgctatgtacgagctt
cagtttgccgtgcccatgtctggtgccatcctcaacaacatcaacacacgcctagatgca
cgtactatgtccatactcctgcgtcacagcgaatcaaagctcgttttcgttgattgcctc
tcacgtgacgtcatcctggacgccatgtctttgctacctccgaataccaagcgccctcct
ctcgtcctcatcgcggatgatgctgaggcagcagaatcatctataaccgatgatttttgc
tgcgcttatgaaagcatggtggagaaaggtgatcctgggttcaagtgggtccagcctcat
agtgagtgggacccgatggtgctaaactacacgtcaggtacaacatcatctcctaaagga
gtagtccattgccatagaagtgttttcaccatcactgttggatccttgattgattgggga
gttccaaaacaacccgtatatttgtggaccctaccgatattccacgccaacggatggagc
tatccttggggcatagcagccgttggtgggaccaacatctgtctccgtaaatttgatggt
ccgacgatctacagcttgatcaaacgacacggtgtcactcacatgtgtggtgctcctgtg
gtgttgaccatgctaacaaactctacaaataaagaaccacttagaaacccaattcagatt
ttaaccgccggagccccaccaccatccgccgtgctattcaggacagagtcattgggtttt
gtagtgagtcatggatacgggttaactgaaacagcagggcttgtggtgtcttgtgcatgg
aaaccaaagtggaatacatttccaccaagcgaaagagctagactcaaggcaagacaagga
gttaagattgttgggttcactgagatcgatgttttggaacccgaatcaggaaagagtgtg
aaacgagacggggtagcactcggtgaagttgttttaaaaggtgggtgtattatgctgggt
tatttaaaagacccaaccggcacatcaaagtgcatgaaagatggctggttttacaccgga
gatgtgggtgttatgcaccaagatggttatttagaaatcaaagataggtccaaagatgtg
atcatcagcggtggagagaatattagcagtgtagagattgagtctgtgctgtatacacat
cctgctgttaacgaggcggctgtggtggctcgacctgatgagttctggggtgagacacca
tgcgcattcgtgggtttgaaggatgggttgactcaaaagcctggtgagaaggatataatt
gatttttgcagggaaaaaatgccacactatatggtgcctaaaactgtggtctttaaagat
gagcttcccaagacatcaactgggaagattcaaaagtttgtgctaagagggattgctaag
ggcatggggtcctcaaaagggagtcgaatgtag
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