Populus trichocarpa (black cottonwood): 18108405
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Entry
18108405 CDS
T01077
Name
(RefSeq) 2-methylpropanoate--CoA ligase CCL4 isoform X1
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
18108405
NCBI-ProteinID:
XP_052305699
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Position
19:10843444..10850871
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AA seq
637 aa
AA seq
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MEELKPMPPSSCPFTPIGFLERAATVYGDCPSVIYNTTTYTWSQTYRRCLKVASSLSSNG
IKPGQVVSVVAPNVPAMYELQFAVPMSGAILNNINTRLDARTISILLRHSESKLVFVDYL
SLDVILEALSLFPPETPCPALVLITDEEEEAPPPPSLSVDFCTYESMVEKGDPEFKWVQP
QSEWDPVVLNYTSGTTSAPKGVVQTHRATFIITIGSLIDWSLPKQAVYLWTLPIFHANGW
SYAWGMAALGGTNICLRRVEAPTIYSLIKRHGVTHMCGAPVVLNMLTNSPNAERLQNPVQ
ILTGGAPPPSAVLFRAESLGFVVSHGYGLTETAGLVTSCAWKPKWNTFPASERAILKSRQ
GVPIVGFTEMGVVDPNTGKSVERDGVSLGEVVLRGGSVMLGYFKDPLGTSMCMKDGWFYT
GDVGVVHSDGYLEVKDRSKDVIISGGENISSVEIESVLYTHPAVNEAAVVARPDEFWGET
PCAFVSLKNGLPHKPGEKDIIDYCREKMAHYMVPKIVVFKDELPKTSTGKIQKYLLREYA
KVVDSSKVKMATGQVGSGFYLPLRSPRWLQTPFIPAPISTSICVPIPRCRPVSLYNFSQS
IFFAKKRGSEIFSIFQKNQGTVLHQPHRLGNTHARFL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactaaagccaatgccaccaagctcatgcccctttacaccgataggcttcctg
gaaagagctgccactgtttatggtgattgcccatccgtcatctacaacaccaccacttac
acgtggtctcaaacctaccgtcgatgtctcaaggttgcatcttcgctatcatccaatggc
atcaagccaggtcaagtggtttccgttgtggcccctaacgttcctgccatgtatgagctt
caatttgccgtgcccatgtctggtgccatcctcaacaacatcaacacccgtcttgacgct
cggaccatttccatactcctgcgtcacagtgagtcaaagctcgtcttcgttgattatttg
tcccttgatgttattcttgaagccctctctttgtttccacctgagactccatgccctgcc
ctcgtcctcattacggacgaggaggaagaagcaccgccaccaccatcactatccgtagac
ttttgtacttatgaaagcatggtggagaaaggagatcctgagttcaagtgggtccagcca
caaagtgagtgggacccggtggttttaaactacacatctggtactacctcagctcctaaa
ggtgtggtacaaacccacagagcaactttcatcataaccattggatccttgattgattgg
agcctaccaaaacaagcagtgtatctgtggaccctgcctatatttcacgccaatgggtgg
agttatgcatggggtatggcagctcttggcgggaccaacatctgtcttcgtagagtggaa
gcccctacgatctacagcttgatcaaaaggcacggggtcactcacatgtgtggcgcacct
gtggtgctaaacatgctaacaaactctcccaacgcggaacgcctacaaaacccagtgcaa
attttaaccgggggagctccacctccatccgccgtgctgttccgggcagagtcacttggt
tttgtggtgagtcatggatacggtttaactgaaacagcagggctggtcacttcgtgtgcg
tggaaaccaaagtggaatacatttccagcaagtgagagagcaatactaaagtcaagacaa
ggagttccgattgttggcttcaccgagatgggcgttgtggatcccaatacaggaaagagt
gtggaaagagatggggtatcacttggtgaagttgttttgagaggtgggagtgtaatgtta
ggttactttaaagatccattaggcacgtcgatgtgcatgaaagatggttggttttacacg
ggcgacgtgggtgttgtgcactcagatggatatttagaggtcaaagataggtccaaagac
gtgatcattagtggtggagagaatattagcagcgtagagatcgagtctgtgttgtataca
catcctgctgttaacgaggcagctgtggtggctaggcctgatgagttttggggcgagaca
ccgtgcgcgtttgtgagtttgaaaaatggtttgcctcacaaacctggtgagaaagatata
attgattattgcagggaaaagatggcgcattatatggtaccaaaaatcgtggtgttcaaa
gatgagcttccaaagacatcaactgggaagattcagaagtatttgctcagagaatatgcc
aaggtcgtggattcttcgaaggtaaaaatggcaaccggacaggtcgggagtggtttttat
ctgcctctacgttctcctcgatggcttcaaacaccctttattcccgctcccatctccacc
tccatttgcgttcccattccccgttgtcgtcccgtctctctgtacaacttcagtcaaagc
atattttttgccaaaaaaagaggttctgaaatattcagtatctttcaaaagaaccaagga
acagtgctccatcagccacatcgtttgggcaacactcatgctcgattcctctga
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