Populus trichocarpa (black cottonwood): 18109784
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Entry
18109784 CDS
T01077
Name
(RefSeq) isovalerate--CoA ligase CCL2
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
18109784
NCBI-ProteinID:
XP_024457909
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Position
5:complement(7174024..7177102)
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AA seq
602 aa
AA seq
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MNLFFKNHKHLTRLPSTFNRFVSSNSSKQPRALFSSFASDLLEPDSWKSMEGLVRCKANY
APLSPISFLERSATVYRDRTSVVYGSLKFTWAETHQRCLKLASALSQLGISRGDVVAALA
PNVPAMYELHFAVPMAGAVFCTLNTRHDSNMVSILLKHSEAKIIFVDHQLLDIARGALDL
LEKTGTKPPMVVLISESDVSSPTGFSSSSYEYESLLANGHSGFEIRQPESEWDPISVNYT
SGTTSRPKGVVYSHRGAYLNTLATLFLHGIGTTPVYLWTVPMFHCNGWCLTWGMAAQGGA
NVCLRKVSPKDIFDSIDQHKVTHMAGAPTVLSMIVNSAVSDKKPLPHKVEIMTGGAPPPP
QIFFKMEKLGFGVSHLYGLTETYGPGTYCSWKPEWDSLPLNERSKMKARQGVQHLGLEDV
DVKDTFTMESVPADGKTIGEIMLRGNTVMSGYLKDSKATEDAFRGGWFRSGDLAVKHSDG
YIEVKDRAKDIVITGGENVCTLEVETVLYNHPAILEVAVVGRPDDLWGQTPCAFVKLREG
FDVDAQDIIKFCRDRLPHYMAPKTVIFEDLPRNSTGKVQKFILREKAKALGSLFRSESQT
TC
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcttcttcaagaaccataaacacttaactcgcttgccatccactttcaacaga
ttcgtcagttcaaattcaagtaaacaacctcgagcactgttctcaagctttgccagtgat
cttcttgaaccagactcatggaaatcaatggagggtcttgtacgttgcaaggcaaattat
gcccctttgtctcctataagcttcttggagcgatcagctacagtttatagggacagaact
tcagttgtttatggttctttgaagtttacatgggctgaaactcatcaacgttgcctcaaa
cttgcctctgctttatcccagttgggaatttctcgtggtgatgtggttgctgctctggcc
cctaatgttccagcaatgtatgagctgcactttgcagttccaatggctggagcagttttt
tgtactcttaatactcgccatgactcgaatatggtgtctatcctactgaaacattcggag
gcaaagattattttcgtggaccaccagttacttgatattgccagaggagcgcttgatctt
ctagaaaagacagggacaaaaccacctatggtggtcttgatttctgaatctgatgtttct
tctcccactggcttcagttcaagtagttacgagtatgaaagcctcttggcaaatggacac
agtggatttgagatcaggcaaccggaaagcgaatgggatcctatcagtgtaaattatact
tctggcacaacgtcaaggcccaaaggagttgtttatagtcacaggggagcatatctcaac
acccttgcgacgcttttcctccatggcattggtacaacgcctgtttacctttggactgtg
cccatgtttcattgcaatggatggtgcctcacttggggtatggcagcacagggtggtgct
aacgtatgcctgagaaaagtctctccaaaagacatatttgacagcattgatcagcacaag
gtgacacacatggcaggagcaccgactgtcttgagcatgattgtgaattcagcagttagt
gacaaaaaaccccttcctcacaaagtggaaattatgacagggggtgcaccaccaccccct
caaatctttttcaagatggaaaagttaggttttggtgtatctcatttgtatggccttaca
gaaacttatggtccagggacttattgctcatggaaacctgaatgggattcacttcctctc
aatgagagatcaaagatgaaagctcgacaaggggtacagcatcttggattggaagatgtt
gacgtaaaggatactttcaccatggaaagtgtaccagcagatggtaaaacgattggagag
attatgctcagaggaaacactgtgatgagtggctacctaaaagactcgaaagcaactgag
gatgctttcagaggcggctggtttagaagtggggatcttgctgtgaaacattctgatgga
tatattgaagtgaaggaccgagcaaaggatattgtgattactggtggagagaatgtatgc
acacttgaagtagaaacagttttgtataatcatccagcaattctcgaggtcgcagttgtt
gggcggccagatgacctctggggacaaaccccttgtgcatttgtgaagttaagagaggga
tttgacgttgatgctcaagatataattaagttttgccgggatcgtttgccacattatatg
gctcccaaaactgtcatttttgaggatttgccgagaaactctactggaaaagtgcagaag
tttattctgagggagaaggcaaaggcattgggtagcctctttaggtcagagtcacaaacc
acctgctga
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