Populus trichocarpa (black cottonwood): 4929748
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Entry
4929748 CDS
T01077
Symbol
Poptr_cp087
Name
(RefSeq) Ycf1
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
Ycf1
Motif
Other DBs
NCBI-GeneID:
4929748
NCBI-ProteinID:
YP_001109565
UniProt:
A4GYX4
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Position
Pltd:complement(125620..131088)
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AA seq
1822 aa
AA seq
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MILKSFILGNLVSLCMKIINSVVVVGLYYGFLTTFSMGPSYLFLLRARVIEEGEEGTEKK
VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPYLLFHFFWNNHKHFFDYGSTT
RNSMRNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNIYMFRCNNKMLFVTSSFVGWLIG
HILFMKWVGLILVWIQQNNSLRSNKYIRSNKYLVSELRNSMARIFSILLFITCVYSLGRI
PSPIFTKKLKETSETEEREEETDVEIETTPETKGTKQEQEGSTEEDPSSSLFSEEKENPD
KIDETEEIRVNGKEKTKDEFHFHFKETCYKNRPVYETFYLDGNQENSKLEIFLDKKDKDL
VWFEKPRVTILFDYKRWNRPFRYIKNDQFKNAVRKEMSQYFFSTCRSDGKERISFTYPPS
LSTFLEMIQRKMSLFTTEKLSSDELYNHWNYNNEQKKKNLSNEFINRVEVLDKGFRVLNI
LEKKTRLCNDETKKEYLPKIYDPFLSGLYRGKVNFFFSPSIINEISIKNYIEMLWINKIY
LILLISNYQEFEPKMEDRIRILKFLFDAIIVDSKNKKIVKKSTEIKKEISKQIPRWSYKL
IDDLEQQEGENEENAAEDHEIRSRKAKRVVIFTDNQENPDSNTYNNSKTKDTTNFDQTGE
VALIRYSQQSDFRRDIIKGSMRTQRRKIAILKLFQANLHSPLFLDRIDKFLFFAFDTSEL
MKIMFINWMCKNAEFTISDSTSTYTEEKTKESDKKEKEEIKNRREEDKREEKVRIEIAET
WDSIIFAQAIRGCVLVIQSILRKYILLPSLIIAKNIIRMLLFQIPEWSEDLKDWNREMHV
KCTYNGVQLSETEFPKNWLTDGIQIKILFPFRLQPWHRSKFKFLSKDPIKKKRQKNDFCF
LTVWGMEAELPFGSPRKELSLFEPIFKKLKKKIRKLKKNGFLTLTILKEKRKLFLHLPKE
TKNWFIKGILFLKEIINKFSKSKRNPILLFGFREVYELNETKNEKNSPINNRTIHKFSTS
IRSMDWINYSLTEKKMKDLNARTKTIRNQIEKITKEKKKRFLISERNISPNKLSYNAKRL
KLKSSKNILQILKRNNAQLVRKSYFFIKILIEKIYIDILLAIINIPRINVQFFLESPRKM
INKYIYMYNKKENHKRIEKTNQNTLIHFISIIKKALNYSNFNKNSKIFYNITSLSQAYVF
YKLSQVQVINLYKLRSVFQYHGASLFLKNEIKDYFGVQGRFQFKLKDTNFRNSVMNEWKN
WVRSTYQYKYDLSQIRWSSLISQKWRNRMNQQHMIQNKDLNKWNLYDKDQLIHYEKQNNF
EVDSLSNQKDNFKKYYRYNILLYKSINYEDKKDSSIYELPFQLNNKQELFYNYKIDKRKL
FDMSGGIPVNKHLTEDDIIDTEKSSHRKYLDWRILHFGLRKKVDIESWIDTGTKQKKNLF
DWMGMNEEILDRPTSNLEFWFFPKFVILCNAYKIKSWVIPIKLLFLNFNGTKNVSENKKI
NKKKNNDPFISISSNETKSIQLKNQNHEEKESEDQVDLESVLVNQEKDVEEDYVRSDRKE
RRKKKQYKSNTEAELDFLLKRYLCFQLRWDDSLNQKIINNIKIYCLLLRLTNPREIIISS
IQRGELSLDILMIQKDLTLTELMKKGILIIESTRLSVKNDGKFIMYQTINILLVHKRKQQ
INQRYRKKNYIDKKNFNESIVINQSLTRNKDKNNYDLPVPENLLSSKHRRELRILISFNS
KNGNDINTEIINNNNIKNHAHIIDKRKHFDRDKNKLIKLKLFLWPNYRLEDLACINRYWF
DTNNASRFSMIRIHICPRLKSR
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgattttgaaatcttttatactaggtaatctagtatccttatgcatgaagataatcaat
tcggtcgttgtggtcggactctattatggatttctgaccacattctccatgggaccctct
tatctcttccttctccgagctcgggttatagaagaaggagaagaaggaaccgagaagaag
gtatcagcaacaacaggttttattacggggcagctcatgatgttcatatcgatctattat
gcgcctctgcatctagcattgggtagacctcatacaataactgtcctagctctaccgtat
cttttgtttcatttcttctggaacaatcacaaacacttttttgattatggatctactacc
agaaattcaatgcgtaatcttagcattcaatgtgtattcctgaataatctcatttttcaa
ttattcaaccatttcattttaccaagttcaatgttagtcagattagtcaacatttatatg
tttcgatgcaacaacaagatgttatttgtaacaagtagttttgttggttggttaattggt
cacattttattcatgaaatgggttggattgatattagtctggatacagcaaaataattct
cttagatcgaataagtacattcgatctaataagtaccttgtgtcagaattgagaaattct
atggctcgaatctttagtattctcttatttattacctgtgtctactctttaggcagaata
ccgtcacccatttttactaagaaactgaaagaaacctcagaaacggaagaaagggaggaa
gaaacagatgtagaaatagaaacaactcccgaaacgaaggggactaaacaggaacaagag
ggatccaccgaagaagatccttcttcttccctcttttcagaagaaaaggagaatcctgac
aaaatcgacgaaacggaagagatccgagtgaatggaaaggaaaaaacaaaggatgaattc
cattttcactttaaagagacatgctataaaaatagacctgtttatgaaactttttattta
gatgggaatcaagaaaattcgaagttagaaatctttttagataaaaaagataaagatctc
gtatggtttgaaaaacctcgtgtaactattcttttcgactataaacgctggaatcgtcca
tttcgatatataaaaaacgatcaatttaagaatgctgtaagaaaggaaatgtcacaatat
tttttttctacatgtcgaagtgatggaaaagaaagaatatcctttacgtatccacccagt
ttgtcaacttttttggaaatgatacaaagaaagatgtctctgttcacaacagaaaaactc
tcctctgatgaattgtataatcattggaattataacaatgaacaaaaaaagaaaaaccta
agtaacgagtttataaatagagtagaagttctagataaggggtttcgtgttctgaatata
ctcgaaaaaaagactagattgtgtaatgatgaaactaaaaaagaatacttacctaaaata
tatgatccttttttgagtgggctctatcgtggaaaagtcaatttttttttttcaccctca
atcataaatgaaatttccataaaaaattacatagagatgctttggataaataaaatttat
cttatccttcttatttctaattatcaagaatttgaaccaaaaatggaggatcgaataaga
attttaaaatttttatttgatgcaattatagtggattccaagaataaaaaaattgtaaaa
aaatctacagaaataaaaaaagaaataagtaaacaaattcctcgatggtcatacaaatta
atcgacgatttggaacaacaagagggtgaaaatgaagagaacgctgcagaggatcatgag
attcgttcacgaaaagccaaacgtgtagtaatttttactgataatcaagagaatcctgat
tctaatacttataataattccaaaactaaagatacaactaattttgatcaaacaggcgaa
gtggctttgatacgttattcacaacaatcggactttcgtcgagatataataaagggctcc
atgcgaacacaaaggcgcaaaatagctattttgaaactgtttcaagcaaatttgcattct
cccctttttttagacagaatagacaaatttcttttttttgcttttgatacttctgagctg
atgaaaataatgtttataaattggatgtgtaaaaacgcagaattcacaatttcagattct
acttctacttatacagaagaaaaaacaaaagaaagtgacaaaaaagaaaaagaagagatc
aaaaacagacgagaagaagacaaaagagaagaaaaagtccgtatagaaatagccgaaacc
tgggatagcattatttttgctcaagcaataagaggttgtgttttagtaattcaatcgatt
cttcgaaaatatattctattgccttcattaataatagctaaaaatatcattcgtatgcta
ttatttcaaattcctgaatggtccgaggatttaaaggattggaatagagaaatgcatgtt
aaatgcacctataatggagttcaattatcagaaacagaatttccgaaaaactggttaaca
gacggtattcaaataaagatcctatttccttttcgactacaaccttggcacagatctaag
tttaaattcctttctaaagatccaataaaaaagaaaagacaaaaaaatgatttttgtttt
ttaacagtttggggaatggaagctgaacttccttttggttctccccgaaaagagctttca
ctttttgaacctatttttaaaaaactaaaaaaaaaaattagaaagttgaaaaaaaatggt
tttctaactctaacaattttaaaagaaaaaagaaaactatttctacatttaccgaaagaa
acaaaaaactggttcatcaaaggtattctatttctaaaagaaataataaataaattttca
aaatcaaaaagaaatccaattctattatttggatttagagaagtatatgaattaaatgaa
actaaaaacgaaaaaaattcaccaatcaataatcggactattcataaattttccacttca
attcgatctatggattggataaactattcactgacagaaaaaaaaatgaaagatctgaat
gccagaacaaagacaataagaaatcaaatagaaaaaattacaaaagaaaagaaaaaacga
tttctaatctcagaaagaaatattagtcctaacaaactaagttataatgctaaaagatta
aaattaaaatcatcaaaaaatattttacagatattaaaaagaaacaatgctcaattagtc
cgtaaatcatatttttttatcaaaattttgattgaaaagatatatatagatatccttcta
gctataattaatattccgaggatcaatgtacagttttttcttgaatcaccaagaaaaatg
attaataaatacatttatatgtataataaaaaagaaaatcacaaaagaattgagaaaaca
aatcaaaatacactaattcactttatctcgattataaaaaaggcattaaattatagtaat
tttaataagaactcgaagattttttataacataacctccttgtcacaagcatatgtattt
tacaaattatcacaagtccaagttattaacctatataagttaagatctgtctttcaatat
catggagcatctctttttcttaagaatgaaataaaagattattttggagtccaaggaaga
tttcagttcaaattaaaagatacaaattttagaaattctgtaatgaatgaatggaaaaac
tgggtaagaagtacttatcaatataaatacgatttatctcagatcagatggtctagctta
atatcgcaaaaatggcgaaatagaatgaatcaacagcatatgattcaaaataaagattta
aataaatggaatttatatgacaaagaccaattaattcattatgaaaaacaaaataatttt
gaagtagattcattatcgaaccaaaaagataattttaaaaaatactatagatataatatt
ttattatataaatccattaattatgaagataaaaaagactcatctatttatgaattacca
ttccaattaaataataagcaagagcttttttataattacaaaatagataaaaggaaatta
tttgatatgtcgggaggtatccctgtcaataagcatctaacagaagatgatattatcgat
acggaaaaaagctcgcatagaaaatatttggattggagaattctccattttggtcttaga
aagaaagtcgatattgaatcctggatcgataccggaaccaaacaaaaaaaaaaccttttt
gattggatgggaatgaatgaagaaatactagatcgtcccacatcaaatttagaattttgg
ttctttccaaaatttgtgatactttgcaacgcatataagataaaatcatgggtgatacca
atcaaattactttttttaaattttaatggaactaaaaatgttagtgaaaataaaaaaatc
aacaaaaagaaaaataacgatccttttatatctatatcatccaatgaaacaaaatccatt
caattaaagaatcaaaatcatgaagaaaaagagtctgaggatcaagtagatcttgaatca
gttctagtaaaccaagaaaaagatgttgaagaagattatgtaagatcagacaggaaagag
cgtagaaagaaaaagcaatacaaaagtaatacggaagcagaacttgatttcttgctaaaa
aggtatttatgctttcaattaagatgggatgattctttaaatcaaaaaataatcaataat
ataaaaatatattgtctcctgcttagattgacaaatccacgagaaattattatatcctct
attcaaaggggagaactgagtctagatattctaatgattcagaaagatttaactcttaca
gaattgatgaaaaagggaatattgattatcgaatcaacccgtctgtcggtaaaaaatgat
ggaaaatttattatgtatcaaaccataaatattttattggttcataagagaaaacaacaa
attaatcaaagatacagaaaaaaaaactatattgataaaaagaattttaacgaatctatt
gtaataaatcaaagtttaactagaaataaagacaaaaataattatgatttacctgttccc
gaaaatcttttatcctctaaacatcgtagagaattgagaattctaatttctttcaattca
aaaaatggaaatgatataaatacagaaattatcaataataataacataaaaaaccacgct
cacattatagataaaaggaaacattttgatagagataaaaataaactaattaaattaaaa
ctttttctttggcccaattatcgattagaagatttagcttgtataaatcgctattggttt
gataccaataatgctagtcggtttagtatgataaggatacatatatgtccacgattaaaa
agtcggtaa
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integrated database retrieval system