Populus trichocarpa (black cottonwood): 7453843
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Entry
7453843 CDS
T01077
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7453843
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
7453843
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
7453843
NCBI-ProteinID:
XP_002322027
UniProt:
B9IDY5
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All DBs
Position
15:complement(1485679..1493477)
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AA seq
447 aa
AA seq
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MSSVSSQSQFRLTQPPSKVLHLRNLPWECTEEELVELGKPFGNVVNTKCNVGPNRNQAFI
EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADAGGNVLLITIEGA
DARLVSIDVLHLVFSAFGFVHKITTFEKMDRFQALVQFSDVETASSAKNALDGRNIPSYL
LPEHLGPCTLRIAYSGHTDLSVKFQSHRSRDYTNPNLPVAQSAIDANGMFSMGLDGKKLE
PESNVLLASIENMQYAVTLDVLHMVFSSFGPVQKIAMFDKNSGLQALIQYPDVQTAVVAK
EALEGHCIYDGGFCKLHLSYSRHNDLSIKVNNDRSRDYTIPNNVMVNPQPSILGQQPVAT
HGPPSHLYTGAQFAPTTEHSMIPQPSSGWATGFPPVPNSMPGQMNNNPYLPPGTMPPQMG
HGMMQMPSHGGPPHTHAMPPYRPYHMQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgtatcgagtcagtcgcaattccgtcttacccaaccgccatctaaggtgttg
catttgagaaacttgccatgggagtgcactgaagaggaattggttgagcttgggaagccg
tttggtaatgttgttaataccaagtgtaatgttggaccgaatagaaatcaagctttcatt
gaatttgcggatctgaatcaagctattgcgatgatatcgtattatgcatcatcctcggag
cctgctcaagttcgagggaagacagtttacttgcagtattctaataggcaagaaatagtg
aacaacaaaacgacagctgatgctggtggaaatgtgttgttgattaccattgaaggggca
gatgcacgcctggtcagcattgatgtcttgcacctggtattttctgcctttgggtttgtt
cataagattactacctttgagaagatggatagattccaggctttggtgcaattctccgat
gtggaaactgcctcttctgcgaaaaatgccctggatggaagaaacatccctagttatctg
cttcctgaacatcttgggccctgtactcttaggatcgcatattctggtcatacagatttg
agtgtaaaatttcagagccatcggagtagggactacactaatccaaaccttcctgttgca
caatcagctatagatgcaaatggaatgttcagcatgggccttgatgggaaaaaactagaa
cctgagagcaatgttcttcttgcatcaatcgagaacatgcagtatgctgtcacattggat
gttttacacatggtcttttcttcttttggtcctgtccagaagattgccatgtttgataaa
aacagtggacttcaggctttaattcaataccctgatgtccagacagctgttgttgccaag
gaagcattggaaggacactgcatctatgatggaggattttgcaagcttcacctttcatac
tcacgccataatgatcttagtattaaggtcaataatgataggagcagagactacacgatt
cccaacaatgtaatggtgaacccccagccttcaattctagggcagcagccagttgcaaca
catggtcctccttctcatctatacactggagctcagtttgctccaactacagagcattca
atgattcctcagccttcttctggatgggccactggctttccaccagtacccaattccatg
cctggccagatgaataataatccttacttgccacctggaactatgccacctcaaatgggc
catggaatgatgcagatgcctagccatggtggcccaccacatactcatgcaatgccccct
tacagaccttatcatatgcaatag
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