Populus trichocarpa (black cottonwood): 7454537
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Entry
7454537 CDS
T01077
Name
(RefSeq) 4-coumarate--CoA ligase-like 9
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00130
Ubiquinone and other terpenoid-quinone biosynthesis
pop00940
Phenylpropanoid biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
pop_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
7454537
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
7454537
Enzymes [BR:
pop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
7454537
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
7454537
NCBI-ProteinID:
XP_002318710
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Position
12:complement(11933990..11938423)
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AA seq
558 aa
AA seq
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MATKSVLAQETTMTTHAINITKGGYCLESKTFQSLRPPATPPPPHQPLSITQFILSLLHS
SAIPTTQKNFLIMPSTRQSLTYSEAINQIYSLSSSLKSLYNLNKNDVSFILCPPSLHVPI
IYLSLLYLGVTISPANPLSSNSELTHQIQLSKPKIAFATSQTAHKLPSFPLGTILIDSPE
FISLLTQISKRDCATNHVEVSQSDMAAILYSSGTTGRVKGVSLTHRNVIAPIAAFQKSSA
ELDPHAVSLLTLPLFHVFGFFLLINEFRWGKTLVLTERFDFEQVLKVVERYRVSDMPVSP
TIILTLLKSDLTNKYDLSSLRRFSCGGAPLSKEVAEKFKRKFPQAEIMQGYGLTEAGAVS
RIIGPEECNRHASVGRLCGNMEAKIVDPLTGEAFGPGKRGELWLRGPSIMKGYVGDEKAT
AETLDSEGWLKTGDLCFFDSEGFLYIVDRLKELIKYKAYQVPPVELEQLLLSNPEIADAA
VIPYPDEEAGQIPMAYVVRKPGSNITEAQIMDSIAKQVAPYKKIRRVAFTDAVPRSPAGK
ILRRELINHALSGALCKL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaagtcagtgctggcacaagaaaccaccatgaccacccatgcaatcaatatt
acaaaaggtggttactgcttggaaagtaaaacctttcaaagtcttagaccacctgctact
ccaccaccaccgcatcaacctctctccataacccaattcatcctttctctcctccactcc
tctgccatcccaaccacccaaaaaaacttccttatcatgccttccacacgtcaatctctc
acttactctgaagccatcaaccagatttactctctttcttcatctctcaagagtctctac
aatttaaacaagaacgatgtctcttttatcctctgcccgccctctctccacgtccccatt
atttatctctctcttctttaccttggtgtcaccatctctcctgccaaccccctaagttcg
aactccgagctgactcaccaaatccaactcagcaaacccaagatcgcatttgctacttcc
caaactgcccacaagcttccctcttttccccttggcacaatcctcattgactcccctgag
ttcatctccttgttgactcaaatctccaaacgagactgtgctaccaaccacgttgaagtg
agtcaatccgacatggcagcgatcctatattcctcgggaacaactgggagagtcaaaggc
gtgtcattgactcacaggaacgtaatagctccaatcgcggcttttcaaaagagctctgca
gaacttgacccacatgcggtttcgttgcttacgctgcctttgtttcatgtttttggcttc
tttttgttgataaatgaatttcggtgggggaagacgttggttttgacggagaggtttgat
tttgagcaagtgttgaaggttgtagagagatatagagtgagtgacatgcctgtgtcgcca
accattatcctgacattactgaaatcggatttgactaacaagtatgatttgagttcattg
cggaggttcagttgcggtggcgcgccattgagcaaggaggttgcagaaaaattcaaaagg
aaatttccacaggctgaaataatgcaggggtatggattaacggaggctggagctgtatct
aggataataggacctgaagaatgtaaccggcatgcttctgttggtcggttgtgtggaaat
atggaagccaaaattgttgatcctctaactggagaggcctttggtcctggcaagagaggg
gagctttggttgcgagggccatccattatgaaaggttatgtaggagatgagaaggcaact
gccgaaaccttggattcagaagggtggttaaagacaggggatctttgtttctttgactcc
gagggcttcctctacattgttgataggctgaaggaattgataaagtacaaggcatatcag
gtgccccctgttgagttggaacaattgctgctgtctaatcctgagattgccgatgctgct
gtaattccgtatcctgatgaagaggcagggcaaattcccatggcctatgtggtgaggaaa
ccaggaagcaatattactgaggctcaaatcatggattccattgcaaaacaggttgcacca
tacaagaagatacgacgagtggcttttactgatgcggtccccagatctcctgccggaaag
atcttgaggcgggagctcatcaatcatgctctctccggtgctctctgtaaattataa
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